RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, human

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOPBP1-204	ENST00000505804	CAPN7	Q9Y6W3	813 aa		4.18	□□□□□ -1.74
TOPBP1-204	ENST00000505804		A0A1B0GVM2	712 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	TAF4	O00268	1085 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	TMEM63A	O94886	807 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	OAZ2	O95190	189 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	AGA	P20933	346 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	MAN1A1	P33908	653 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	MLH1	P40692	756 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	PCYT1A	P49585	367 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	NUDT6	P53370	316 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804		Q0VFX4	171 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	ST3GAL1	Q11201	340 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	TMEM115	Q12893	351 aa	Predicted RBP	4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	DSTYK	Q6XUX3	929 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	SFTPA2	Q8IWL1	248 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	CCDC105	Q8IYK2	499 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	ETNPPL	Q8TBG4	499 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	ADAMTS14	Q8WXS8	1223 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	OTULIN	Q96BN8	352 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	FBXL8	Q96CD0	374 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	ZNF570	Q96NI8	536 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	TKTL2	Q9H0I9	626 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	BPIFA1	Q9NP55	256 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	DDX4	Q9NQI0	724 aa	Known RBP	4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	CISD1	Q9NZ45	108 aa	Known RBP	4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	OR6C3	Q9NZP0	311 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	MKLN1	Q9UL63	735 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	PSAT1	Q9Y617	370 aa		4.17	□□□□□ -1.74
TOPBP1-204	ENST00000505804	EVPL	Q92817	2033 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804		A0A087X0M5	115 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804		A0A1B0GX30	115 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	TTC36	A6NLP5	189 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	USP17L23	D6RBM5	183 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	TIMM23	O14925	209 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	SEC14L2	O76054	403 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	VNN2	O95498	520 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	ALPL	P05186	524 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	CLEC3B	P05452	202 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	HOXC6	P09630	235 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	HSPA1A	P0DMV8	641 aa	Known RBP	4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	HSPA1B	P0DMV9	641 aa	Known RBP	4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	GABRB2	P47870	512 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	KCNJ4	P48050	445 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	RARS	P54136	660 aa	Known RBP	4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	RPS3A	P61247	264 aa	Known RBP	4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	RPL7A	P62424	266 aa	Known RBP	4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	TCTN1	Q2MV58	587 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	ALG11	Q2TAA5	492 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	COL28A1	Q2UY09	1125 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	CCDC30	Q5VVM6	783 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	HIST2H2BC	Q6DN03	193 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	HIST2H2BD	Q6DRA6	164 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	LCTL	Q6UWM7	567 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	C9orf47	Q6ZRZ4	202 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	C1orf122	Q6ZSJ8	110 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	TMTC3	Q6ZXV5	915 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	SLC35F3	Q8IY50	421 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	B4GALNT2	Q8NHY0	566 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	PSPC1	Q8WXF1	523 aa	Known RBP	4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	GTF3C6	Q969F1	213 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	PERP	Q96FX8	193 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	SLC6A13	Q9NSD5	602 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	HAO1	Q9UJM8	370 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	PNMA2	Q9UL42	364 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	MYO6	Q9UM54	1294 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	PCDHA7	Q9UN72	937 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	PIAS3	Q9Y6X2	628 aa		4.16	□□□□□ -1.74
TOPBP1-204	ENST00000505804	IGHV4-28	A0A0C4DH34	117 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	EIF3CL	B5ME19	914 aa	Known RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	USO1	O60763	962 aa	Known RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	MMP2	P08253	660 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	CDA	P32320	146 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	RPL3	P39023	403 aa	Known RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	PBX3	P40426	434 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	CDKN2A	P42771	156 aa	Known RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	PIP4K2A	P48426	406 aa	Predicted RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	AMT	P48728	403 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	MXI1	P50539	228 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	GEMIN4	P57678	1058 aa	Known RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	SORD	Q00796	357 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	FOXD4	Q12950	439 aa	Predicted RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	SIM2	Q14190	667 aa	Predicted RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	FRG1	Q14331	258 aa	Known RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	FGFBP1	Q14512	234 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	SHB	Q15464	509 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	C2orf68	Q2NKX9	166 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	TDRD12	Q587J7	1177 aa	Known RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	GPATCH4	Q5T3I0	446 aa	Known RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	TYW3	Q6IPR3	259 aa	Known RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	SHF	Q7M4L6	423 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	HAPLN4	Q86UW8	402 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	AADAT	Q8N5Z0	425 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	ZBTB2	Q8N680	514 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	OR14A16	Q8NHC5	309 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	HUS1B	Q8NHY5	278 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	INTS12	Q96CB8	462 aa	Known RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	NTPCR	Q9BSD7	190 aa	Known RBP	4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	UBA5	Q9GZZ9	404 aa		4.15	□□□□□ -1.75
TOPBP1-204	ENST00000505804	KIF9	Q9HAQ2	790 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms