RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ARL8BQ9NVJ2 186 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 MARCOQ9UEW3 520 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 CCDC189A1A4V9 331 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 MUSKO15146 869 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 LILRB3O75022 631 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 CTSAP10619 480 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 ATP5F1P24539 256 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 ACAP2Q15057 778 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 HSF5Q4G112 596 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 DNAL1Q4LDG9 190 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 RTL10Q7L3V2 364 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 ALYREFQ86V81 257 aaKnown RBP17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 SLC22A9Q8IVM8 553 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 ACVR1CQ8NER5 493 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 GATA5Q9BWX5 397 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 RNF38Q9H0F5 515 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 MUC3BQ9H195 1237 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 C1orf21Q9H246 121 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 NLE1Q9NVX2 485 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 BAIAP2L1Q9UHR4 511 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 STK38LQ9Y2H1 464 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 VWA7Q9Y334 891 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 GFRA2O00451 464 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 GYG2O15488 501 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 LYPLA1O75608 230 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 LMNAP02545 664 aaKnown RBP17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 SAT1P21673 171 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 PRDX6P30041 224 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 ABCG1P45844 678 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 DEFB103AP81534 67 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 SMAD3P84022 425 aaKnown RBP17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 MPP7Q5T2T1 576 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 HECTD2Q5U5R9 776 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 CXorf57Q6NSI4 855 aaKnown RBP17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 FBXO46Q6PJ61 603 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 AFTPHQ6ULP2 937 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 Q6ZNB5 142 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 TMPRSS6Q8IU80 811 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 MRPS31Q92665 395 aaKnown RBP17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 CCDC106Q9BWC9 280 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 TDRD1Q9BXT4 1180 aaKnown RBP17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 ZBP1Q9H171 429 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 NCKIPSDQ9NZQ3 722 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 XPR1Q9UBH6 696 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 TRIM33Q9UPN9 1127 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 MYLKQ15746 1914 aa17.36■□□□□ 0.37
TRAPPC11-204ENST00000505676 C2orf78A6NCI8 922 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 C2orf81A6NN90 581 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 F8W8V4 182 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 SPECC1L-ADORA2AF8WAN1 911 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 SLC22A2O15244 555 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 S1PR4O95977 384 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 C1RP00736 705 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 IHHQ14623 411 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 TYSND1Q2T9J0 566 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 RNF219Q5W0B1 726 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 CNSTQ6PJW8 725 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 LONP2Q86WA8 852 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 CEP97Q8IW35 865 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 CPXM2Q8N436 756 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 AFAP1L2Q8N4X5 818 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 DCAF4L2Q8NA75 395 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 BLOC1S5Q8TDH9 187 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 ZFRQ96KR1 1074 aaKnown RBP17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 ZNF395Q9H8N7 513 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 GKN1Q9NS71 199 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 CD3EAPO15446 510 aaKnown RBP17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 LUC7L3O95232 432 aaKnown RBP17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 RAG1P15918 1043 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 CDC25CP30307 473 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 MAPK8P45983 427 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 IDH3AP50213 366 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 SLC7A9P82251 487 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 TUBB3Q13509 450 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 CYTH1Q15438 398 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 TMEM150AQ86TG1 271 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 MFSD6LQ8IWD5 586 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 ELMOD1Q8N336 334 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 TDRD5Q8NAT2 981 aaKnown RBP17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 FAR2Q96K12 515 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 CNDP1Q96KN2 507 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 GCNAQ96QF7 691 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 CATSPERZQ9NTU4 200 aa17.35■□□□□ 0.37
TRAPPC11-204ENST00000505676 H0Y626 953 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 TK2O00142 265 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 ZNF195O14628 629 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 TEX28O15482 410 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 FGF19O95750 216 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 ADSLP30566 484 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 GRIA4P48058 902 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 RPL14P50914 215 aaKnown RBP17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 SUOXP51687 545 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 GALNT1Q10472 559 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 EPGNQ6UW88 154 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 PTAR1Q7Z6K3 402 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 OR4L1Q8NH43 312 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 DIS3LQ8TF46 1054 aaKnown RBP17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 UTP4Q969X6 686 aaKnown RBP17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 MCUR1Q96AQ8 359 aa17.34■□□□□ 0.37
TRAPPC11-204ENST00000505676 NXNL1Q96CM4 212 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms