RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 KCTD3Q9Y597 815 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 MAD1L1Q9Y6D9 718 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 FAM169AQ9Y6X4 670 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 PLXNB3Q9ULL4 1909 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 AP3B1O00203 1094 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 RNF40O75150 1001 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 SIN3BO75182 1162 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 FAM155BO75949 473 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 PAPSS2O95340 614 aaPredicted RBP10.46□□□□□ -0.73
TPM3-217ENST00000504663 IGSF6O95976 241 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 F7P08709 466 aaPredicted RBP10.46□□□□□ -0.73
TPM3-217ENST00000504663 PIRTP0C851 137 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 ALADP13716 330 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 POLR2EP19388 210 aaKnown RBP10.46□□□□□ -0.73
TPM3-217ENST00000504663 ADRA1DP25100 572 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 OAS2P29728 719 aaKnown RBP10.46□□□□□ -0.73
TPM3-217ENST00000504663 SLCO1A2P46721 670 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 ARSDP51689 593 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 ZNF140P52738 457 aaPredicted RBP10.46□□□□□ -0.73
TPM3-217ENST00000504663 EIF4HQ15056 248 aaKnown RBP10.46□□□□□ -0.73
TPM3-217ENST00000504663 MYLK3Q32MK0 819 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 ITPRIPL2Q3MIP1 535 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 KRT71Q3SY84 523 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 LEXMQ3ZCV2 418 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 CARD16Q5EG05 197 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 TSTD2Q5T7W7 516 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 KIAA0930Q6ICG6 404 aaPredicted RBP10.46□□□□□ -0.73
TPM3-217ENST00000504663 ESRP1Q6NXG1 681 aaKnown RBP10.46□□□□□ -0.73
TPM3-217ENST00000504663 ZNF449Q6P9G9 518 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 CAMK1DQ8IU85 385 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 CCNJLQ8IV13 435 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 PALM2Q8IXS6 379 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 DNAAF3Q8N9W5 541 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 KDM1BQ8NB78 822 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 LPCAT1Q8NF37 534 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 MDGA1Q8NFP4 955 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 CERS2Q96G23 380 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 NAT9Q9BTE0 207 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 PHF7Q9BWX1 381 aaPredicted RBP10.46□□□□□ -0.73
TPM3-217ENST00000504663 CPEB1Q9BZB8 566 aaKnown RBP10.46□□□□□ -0.73
TPM3-217ENST00000504663 MED4Q9NPJ6 270 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 TRPV5Q9NQA5 729 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 VPS18Q9P253 973 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 DEC1Q9P2X7 70 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 SLC24A2Q9UI40 661 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 RIMKLBQ9ULI2 386 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 PSAT1Q9Y617 370 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 RPS6KL1Q9Y6S9 549 aa10.46□□□□□ -0.73
TPM3-217ENST00000504663 LRRK1Q38SD2 2015 aa10.46□□□□□ -0.74
TPM3-217ENST00000504663 A0A0U1RQS6 177 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.45□□□□□ -0.74
TPM3-217ENST00000504663 EXOC1LA0A1B0GW35 172 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 CCDC78A2IDD5 438 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 K7EQS6 105 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 RASGRF2O14827 1237 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 SPINT1O43278 529 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 KAT7O95251 611 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 FOSL2P15408 326 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 CREB1P16220 341 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 SLC8A1P32418 973 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 STX2P32856 288 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 PHBP35232 272 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 IL12RB1P42701 662 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 MAPK8P45983 427 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 SNRPD1P62314 119 aaKnown RBP10.45□□□□□ -0.74
TPM3-217ENST00000504663 ZNF234Q14588 700 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 PTPRCAPQ14761 206 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 SMAD1Q15797 465 aaKnown RBP10.45□□□□□ -0.74
TPM3-217ENST00000504663 KLHL38Q2WGJ6 581 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 EGFLAMQ63HQ2 1017 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 ADGRD1Q6QNK2 874 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 SH2D5Q6ZV89 423 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 CNTN4Q8IWV2 1026 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 YAF2Q8IY57 180 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 RIBC1Q8N443 379 aaPredicted RBP10.45□□□□□ -0.74
TPM3-217ENST00000504663 ZNF366Q8N895 744 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.45□□□□□ -0.74
TPM3-217ENST00000504663 PPHLN1Q8NEY8 458 aaKnown RBP10.45□□□□□ -0.74
TPM3-217ENST00000504663 OR13C4Q8NGS5 318 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 PBXIP1Q96AQ6 731 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 IFT43Q96FT9 208 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 ATP6V1G3Q96LB4 118 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 MCCC1Q96RQ3 725 aaPredicted RBP10.45□□□□□ -0.74
TPM3-217ENST00000504663 TUBGCP5Q96RT8 1024 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 LYSMD1Q96S90 227 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 CYTH2Q99418 400 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 ACOX2Q99424 681 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 CIPCQ9C0C6 399 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 KCNK12Q9HB15 430 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 CD248Q9HCU0 757 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 THAP10Q9P2Z0 257 aaPredicted RBP10.45□□□□□ -0.74
TPM3-217ENST00000504663 HECAQ9UBI9 543 aaPredicted RBP10.45□□□□□ -0.74
TPM3-217ENST00000504663 PPIL1Q9Y3C6 166 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 STARD13Q9Y3M8 1113 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 ARL5AQ9Y689 179 aa10.45□□□□□ -0.74
TPM3-217ENST00000504663 A0A0J9YYE9 177 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 MAGEB16A2A368 324 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 HEATR9A2RTY3 570 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 SMIM23A6NLE4 172 aa10.44□□□□□ -0.74
TPM3-217ENST00000504663 ANKRD66B4E2M5 251 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms