RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 AREL1O15033 823 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 AP1G1O43747 822 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 MFSD11O43934 449 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 AKR1B10O60218 316 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 MAFKO60675 156 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 ICMTO60725 284 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 MMP20O60882 483 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 MAP3K6O95382 1288 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 CER1O95813 267 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 IGSF6O95976 241 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 PAK4O96013 591 aaPredicted RBP8.09□□□□□ -1.11
RFC1-207ENST00000504554 ZNF883P0CG24 379 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 DESP17661 470 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 SSR1P43307 286 aaKnown RBP8.09□□□□□ -1.11
RFC1-207ENST00000504554 C21orf59P57076 290 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 GEMIN4P57678 1058 aaKnown RBP8.09□□□□□ -1.11
RFC1-207ENST00000504554 SIM1P81133 766 aaPredicted RBP8.09□□□□□ -1.11
RFC1-207ENST00000504554 IL10RBQ08334 325 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 SLC10A7Q0GE19 358 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 IHHQ14623 411 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 MESDQ14696 234 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 NCBP2-AS2Q69YL0 99 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 NEK5Q6P3R8 708 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 FBXL19Q6PCT2 694 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 KANSL1Q7Z3B3 1105 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 ADAT2Q7Z6V5 191 aaKnown RBP8.09□□□□□ -1.11
RFC1-207ENST00000504554 SLCO6A1Q86UG4 719 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 CAMK1DQ8IU85 385 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 SLC22A18ASQ8N1D0 253 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 PQLC3Q8N755 202 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 PNPLA1Q8N8W4 532 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 MFSD2AQ8NA29 543 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 OR13H1Q8NG92 308 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 SAP25Q8TEE9 199 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 CASKIN2Q8WXE0 1202 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 CTNNBL1Q8WYA6 563 aaPredicted RBP8.09□□□□□ -1.11
RFC1-207ENST00000504554 RAPGEF5Q92565 580 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 FUBP1Q96AE4 644 aaKnown RBP8.09□□□□□ -1.11
RFC1-207ENST00000504554 PPP1R16AQ96I34 528 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 LRIG1Q96JA1 1093 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 ELF4Q99607 663 aaPredicted RBP8.09□□□□□ -1.11
RFC1-207ENST00000504554 NCAPGQ9BPX3 1015 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 DEF6Q9H4E7 631 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 SCHIP1Q9P0W5 487 aaPredicted RBP8.09□□□□□ -1.11
RFC1-207ENST00000504554 UVRAGQ9P2Y5 699 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 PNMA8BQ9ULN7 279 aaPredicted RBP8.09□□□□□ -1.11
RFC1-207ENST00000504554 HYOU1Q9Y4L1 999 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 PI4KAP42356 2102 aa8.09□□□□□ -1.11
RFC1-207ENST00000504554 CACNA1EQ15878 2313 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 LOC100996750A0A140TA64 210 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 TSPAN11A1L157 253 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 C3orf70A6NLC5 250 aaPredicted RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 PRAMEF26H0Y7S4 382 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 CDK2AP1O14519 115 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 TRAFD1O14545 582 aaPredicted RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 HYAL3O43820 417 aaPredicted RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 PALMO75781 387 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 MTA2O94776 668 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 GM2AP17900 193 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 CR2P20023 1033 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 ARL4AP40617 200 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 ZNF135P52742 658 aaPredicted RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 SLC10A2Q12908 348 aaPredicted RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 KRT81Q14533 505 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 LBRQ14739 615 aaKnown RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 STAT4Q14765 748 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 PTPRRQ15256 657 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 TRIP6Q15654 476 aaKnown RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 SETMARQ53H47 684 aaPredicted RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 ANKRD20A8PQ5CZ79 823 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 ZNF385CQ66K41 422 aaPredicted RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 TMCO3Q6UWJ1 677 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 ABI3BPQ7Z7G0 1075 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 SRLQ86TD4 932 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 TTC7BQ86TV6 843 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 MARCH9Q86YJ5 346 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 RNF217Q8TC41 542 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 SETD7Q8WTS6 366 aaKnown RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 SCG3Q8WXD2 468 aaKnown RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 FAF2Q96CS3 445 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 CCDC42Q96M95 316 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 OSBPL1AQ9BXW6 950 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 KRTAP4-6Q9BYQ5 205 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 SLC17A9Q9BYT1 436 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 CPEB1Q9BZB8 566 aaKnown RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 GOLPH3Q9H4A6 298 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 SLC32A1Q9H598 525 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 SUV39H2Q9H5I1 410 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 ZNF395Q9H8N7 513 aaPredicted RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 SP110Q9HB58 689 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 PCDH12Q9NPG4 1184 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 MBNL1Q9NR56 388 aaKnown RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 GPR27Q9NS67 375 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 ZNHIT6Q9NWK9 470 aaKnown RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 DKK3Q9UBP4 350 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 SALL4Q9UJQ4 1053 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 TPX2Q9ULW0 747 aaKnown RBP8.08□□□□□ -1.12
RFC1-207ENST00000504554 DMTF1Q9Y222 760 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 COQ6Q9Y2Z9 468 aa8.08□□□□□ -1.12
RFC1-207ENST00000504554 PCDHGB2Q9Y5G2 931 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms