RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 COL9A1P20849 921 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 UBA1P22314 1058 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 NR2F2P24468 414 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 RPL21P46778 160 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 DCDC1P59894 354 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CYP4F2P78329 520 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 KRT17Q04695 432 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CYP4F3Q08477 520 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TTLL12Q14166 644 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TFDP2Q14188 446 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 RFTN1Q14699 578 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TMED2Q15363 201 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TPSAB1Q15661 275 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TIMM50Q3ZCQ8 353 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SUPT20HL1Q3ZLR7 823 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 IER5Q5VY09 327 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 IZUMO3Q5VZ72 239 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SEZ6L2Q6UXD5 910 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 R3HCC1LQ7Z5L2 792 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SNX20Q7Z614 316 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TFAP2DQ7Z6R9 452 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 KBTBD6Q86V97 674 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SLC26A11Q86WA9 606 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ARID3BQ8IVW6 561 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CCDC60Q8IWA6 550 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SMYD4Q8IYR2 804 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CLEC4FQ8N1N0 589 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CNTD1Q8N815 330 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 LSMEM1Q8N8F7 131 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 KYQ8NBH2 561 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 IL31RAQ8NI17 732 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TAMM41Q96BW9 452 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 VMP1Q96GC9 406 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 MYO19Q96H55 970 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 FAR2Q96K12 515 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TWNKQ96RR1 684 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 DOK1Q99704 481 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 MIPEPQ99797 713 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TRIM51Q9BSJ1 452 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 FGFBP2Q9BYJ0 223 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 GRIP2Q9C0E4 1043 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 VPS37BQ9H9H4 285 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 POLE3Q9NRF9 147 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 THG1LQ9NWX6 298 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 NINJ2Q9NZG7 142 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ANKMY1Q9P2S6 941 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 UBA2Q9UBT2 640 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 RAPGEFL1Q9UHV5 662 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 VWA7Q9Y334 891 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 A0A1B0GVG6 124 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 K7EPI3 171 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DNALI1O14645 258 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ANKRD28O15084 1053 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 NUAK1O60285 661 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SEMG1P04279 462 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ITGA4P13612 1032 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 HOXB1P14653 301 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF16P17020 682 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CDC25CP30307 473 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 POLR2BP30876 1174 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 MCM7P33993 719 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SOX5P35711 763 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TSPAN7P41732 249 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 NSFP46459 744 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ITGA1P56199 1179 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 MPP1Q00013 466 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 PLOD1Q02809 727 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 FAAP100Q0VG06 881 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 BST2Q10589 180 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SEMA5AQ13591 1074 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 FLOT2Q14254 428 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 INPP5AQ14642 412 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 DGUOKQ16854 277 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 LSM12Q3MHD2 195 aaKnown RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SWSAP1Q6NVH7 229 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 LVRNQ6Q4G3 990 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 IDO2Q6ZQW0 420 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 KANSL1Q7Z3B3 1105 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 AKAP14Q86UN6 197 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 GPR180Q86V85 440 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 WDR49Q8IV35 697 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 UNC45BQ8IWX7 931 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TCEAL8Q8IYN2 117 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ADGRF4Q8IZF3 695 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SIX6OS1Q8N1H7 587 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 EXD1Q8NHP7 514 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SETD6Q8TBK2 473 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 KRT35Q92764 455 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 WBP2Q969T9 261 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 MS4A14Q96JA4 679 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF594Q96JF6 807 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SPACA7Q96KW9 195 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 QKIQ96PU8 341 aaKnown RBP eCLIP2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TCF12Q99081 682 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 CEP44Q9C0F1 390 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TMEM168Q9H0V1 697 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 SIAEQ9HAT2 523 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 TMEM30AQ9NV96 361 aa2.8□□□□□ -1.96
NEDD4-204ENST00000503468 NPAP1Q9NZP6 1156 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms