RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 FAM193AP78312 1265 aa16.6■□□□□ 0.25
SCLT1-205ENST00000503401 SPEM2Q0P670 501 aa16.6■□□□□ 0.25
SCLT1-205ENST00000503401 PCSK7Q16549 785 aa16.6■□□□□ 0.25
SCLT1-205ENST00000503401 KCTD19Q17RG1 926 aaPredicted RBP16.6■□□□□ 0.25
SCLT1-205ENST00000503401 WDR45BQ5MNZ6 344 aa16.6■□□□□ 0.25
SCLT1-205ENST00000503401 ARMC12Q5T9G4 340 aa16.6■□□□□ 0.25
SCLT1-205ENST00000503401 ZCCHC9Q8N567 271 aaKnown RBP16.6■□□□□ 0.25
SCLT1-205ENST00000503401 DNASE2BQ8WZ79 361 aa16.6■□□□□ 0.25
SCLT1-205ENST00000503401 FAM122AQ96E09 287 aa16.6■□□□□ 0.25
SCLT1-205ENST00000503401 VAT1Q99536 393 aa16.6■□□□□ 0.25
SCLT1-205ENST00000503401 ORAI3Q9BRQ5 295 aa16.6■□□□□ 0.25
SCLT1-205ENST00000503401 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.6■□□□□ 0.25
SCLT1-205ENST00000503401 RSPH14Q9UHP6 348 aa16.6■□□□□ 0.25
SCLT1-205ENST00000503401 A0A0U1RQS6 177 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 RIOK3O14730 519 aaKnown RBP16.59■□□□□ 0.25
SCLT1-205ENST00000503401 GFRA3O60609 400 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 PMPCBO75439 489 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 PRLP01236 227 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 CTPS1P17812 591 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 OASLQ15646 514 aaKnown RBP16.59■□□□□ 0.25
SCLT1-205ENST00000503401 ZNF284Q2VY69 593 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 ANKRD20A2Q5SQ80 823 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 ANKRD20A1Q5TYW2 823 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 ANKRD20A3Q5VUR7 823 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 TRIM69Q86WT6 500 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 HORMAD1Q86X24 394 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 SYT12Q8IV01 421 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 RASGEF1CQ8N431 466 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 PIH1D2Q8WWB5 315 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 RUBCNQ92622 972 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 NAPGQ99747 312 aaPredicted RBP16.59■□□□□ 0.25
SCLT1-205ENST00000503401 MYOCQ99972 504 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 FERMT1Q9BQL6 677 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 AP1M1Q9BXS5 423 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 PCDH9Q9HC56 1237 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 TRHDEQ9UKU6 1024 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 GVINP1Q7Z2Y8 2422 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 CACNA1EQ15878 2313 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 A0A1W2PPC4 97 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 IGLON5A6NGN9 336 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 GOLGA8CPA6NN73 597 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 WNT9AO14904 365 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 SLC31A1O15431 190 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 LATO43561 262 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 TSPAN6O43657 245 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 FZD6O60353 706 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 MMP20O60882 483 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 STK10O94804 968 aaKnown RBP16.59■□□□□ 0.25
SCLT1-205ENST00000503401 ALPIP09923 528 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 CD27P26842 260 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 MMP12P39900 470 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 CCR5P51681 352 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 POLR2LP62875 67 aaKnown RBP16.59■□□□□ 0.25
SCLT1-205ENST00000503401 FGL2Q14314 439 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 GALNT3Q14435 633 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 TMEM259Q4ZIN3 620 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 TCEAL6Q6IPX3 200 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 ERAP2Q6P179 960 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 LAYNQ6UX15 382 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 PRUNE1Q86TP1 453 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 LPCAT1Q8NF37 534 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 TCEAL3Q969E4 200 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 TRIM44Q96DX7 344 aaPredicted RBP16.59■□□□□ 0.25
SCLT1-205ENST00000503401 OXNAD1Q96HP4 312 aaPredicted RBP16.59■□□□□ 0.25
SCLT1-205ENST00000503401 FEM1CQ96JP0 617 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 SPATA13Q96N96 652 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 PARD6AQ9NPB6 346 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 FZD3Q9NPG1 666 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 FSCN3Q9NQT6 498 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 PHTF1Q9UMS5 762 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 ZNF148Q9UQR1 794 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 CA5BQ9Y2D0 317 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 COQ6Q9Y2Z9 468 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 PCDHGA5Q9Y5G8 931 aa16.59■□□□□ 0.25
SCLT1-205ENST00000503401 CTAGE9A4FU28 777 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 PSMB4P28070 264 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 PLA2G5P39877 138 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 KCNJ1P48048 391 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 EPHB1P54762 984 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 RPS21P63220 83 aaKnown RBP16.58■□□□□ 0.24
SCLT1-205ENST00000503401 ELP6Q0PNE2 266 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 RALGDSQ12967 914 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 CCNG2Q16589 344 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 KIAA1161Q6NSJ0 714 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 NEK5Q6P3R8 708 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 TAB3Q8N5C8 712 aaPredicted RBP16.58■□□□□ 0.24
SCLT1-205ENST00000503401 PRELID2Q8N945 189 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 C1orf216Q8TAB5 229 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 CXorf40AQ8TE69 158 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 TADA1Q96BN2 335 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 CAPZA3Q96KX2 299 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 SLC6A18Q96N87 628 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 FCRL5Q96RD9 977 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 GORASP1Q9BQQ3 440 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 FRMD8P1Q9BZ68 369 aaPredicted RBP16.58■□□□□ 0.24
SCLT1-205ENST00000503401 GBA3Q9H227 469 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 B4GALT6Q9UBX8 382 aa16.58■□□□□ 0.24
SCLT1-205ENST00000503401 TP53BP1Q12888 1972 aaPredicted RBP16.57■□□□□ 0.24
SCLT1-205ENST00000503401 NPIPB15A6NHN6 443 aaPredicted RBP16.57■□□□□ 0.24
SCLT1-205ENST00000503401 PGRMC1O00264 195 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms