RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 HIST2H2ACQ16777 129 aaPredicted RBP4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 C2orf68Q2NKX9 166 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 COL28A1Q2UY09 1125 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 DLK2Q6UY11 383 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 ATF7IPQ6VMQ6 1270 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 CCDC129Q6ZRS4 1044 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 DIS3L2Q8IYB7 885 aaKnown RBP4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 CCDC105Q8IYK2 499 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 AADATQ8N5Z0 425 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 TDRD7Q8NHU6 1098 aaKnown RBP4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 TRIB2Q92519 343 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 ZNF479Q96JC4 524 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 C7orf26Q96N11 449 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 SIN3AQ96ST3 1273 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 SF3B5Q9BWJ5 86 aaKnown RBP4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 ESRP2Q9H6T0 727 aaKnown RBP4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 MAGEE1Q9HCI5 957 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 SMYD2Q9NRG4 433 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 TAS2R10Q9NYW0 307 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 OR6C3Q9NZP0 311 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 MKLN1Q9UL63 735 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 MYO6Q9UM54 1294 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 FAM96BQ9Y3D0 163 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 PIAS3Q9Y6X2 628 aa4.4□□□□□ -1.71
CDC42SE2-204ENST00000502639 A0A1B0GVM2 712 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 DYTNA2CJ06 578 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 BCAT2O15382 392 aaPredicted RBP4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 INSIG1O15503 277 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 SEC14L5O43304 696 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 TMEM63AO94886 807 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 VNN2O95498 520 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 HOXC6P09630 235 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 ZNF12P17014 697 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 MLH1P40692 756 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 PDLIM4P50479 330 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 NEXNQ0ZGT2 675 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 TMEM115Q12893 351 aaPredicted RBP4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 FHL1Q13642 323 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 FGFBP1Q14512 234 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 EFNB3Q15768 340 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 FAM180BQ6P0A1 224 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 CPLX2Q6PUV4 134 aaKnown RBP4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 QSOX2Q6ZRP7 698 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 MTSS1LQ765P7 747 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 TBC1D1Q86TI0 1168 aaPredicted RBP4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 CLIP4Q8N3C7 705 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 TEX19Q8NA77 164 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 FBXL8Q96CD0 374 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 SAAL1Q96ER3 474 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 PPP1R13BQ96KQ4 1090 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 NAP1L4Q99733 375 aaKnown RBP4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 H2AFJQ9BTM1 129 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 HIF1ANQ9NWT6 349 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 CISD1Q9NZ45 108 aaKnown RBP4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 ABI3Q9P2A4 366 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 AASSQ9UDR5 926 aa4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 AGO1Q9UL18 857 aaKnown RBP4.39□□□□□ -1.71
CDC42SE2-204ENST00000502639 A0A1W2PQF6 199 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 ASAP2O43150 1006 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 HSPA12AO43301 675 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 KCNAB3O43448 404 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 CLEC3BP05452 202 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 DDIT3P35638 169 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 PBX3P40426 434 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 CDKN2AP42771 156 aaKnown RBP4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 CTCFP49711 727 aaPredicted RBP4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 EIF3BP55884 814 aaKnown RBP4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 SIM2Q14190 667 aaPredicted RBP4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 MMEL1Q495T6 779 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 TDRD12Q587J7 1177 aaKnown RBP4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 DCAF6Q58WW2 860 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 GPATCH4Q5T3I0 446 aaKnown RBP4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 CDC73Q6P1J9 531 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 C8orf82Q6P1X6 216 aaPredicted RBP4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 LCTLQ6UWM7 567 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 C1orf122Q6ZSJ8 110 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 MAATS1Q7Z4T9 603 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 HAPLN4Q86UW8 402 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 ZDHHC17Q8IUH5 632 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 NOC3LQ8WTT2 800 aaKnown RBP4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 PSPC1Q8WXF1 523 aaKnown RBP4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 SLC25A33Q9BSK2 321 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 MAF1Q9H063 256 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 RANBP17Q9H2T7 1088 aaKnown RBP4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 MKKSQ9NPJ1 570 aaPredicted RBP4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 SMC4Q9NTJ3 1288 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 PSAT1Q9Y617 370 aa4.38□□□□□ -1.71
CDC42SE2-204ENST00000502639 IGLV5-52A0A0A0MRZ9 124 aa4.37□□□□□ -1.71
CDC42SE2-204ENST00000502639 WNT9BO14905 357 aa4.37□□□□□ -1.71
CDC42SE2-204ENST00000502639 NGFRP08138 427 aa4.37□□□□□ -1.71
CDC42SE2-204ENST00000502639 MMP2P08253 660 aa4.37□□□□□ -1.71
CDC42SE2-204ENST00000502639 CYC1P08574 325 aa4.37□□□□□ -1.71
CDC42SE2-204ENST00000502639 ACAA1P09110 424 aaPredicted RBP4.37□□□□□ -1.71
CDC42SE2-204ENST00000502639 SNHG28P0DPA3 235 aa4.37□□□□□ -1.71
CDC42SE2-204ENST00000502639 MAPK4P31152 587 aa4.37□□□□□ -1.71
CDC42SE2-204ENST00000502639 CDAP32320 146 aa4.37□□□□□ -1.71
CDC42SE2-204ENST00000502639 GABRB2P47870 512 aa4.37□□□□□ -1.71
CDC42SE2-204ENST00000502639 PIP4K2AP48426 406 aaPredicted RBP4.37□□□□□ -1.71
CDC42SE2-204ENST00000502639 BRWD1-AS2P59051 145 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms