RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 SSR1P43307 286 aaKnown RBP8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 DUSP3P51452 185 aaPredicted RBP8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 CDH6P55285 790 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 AP1S1P61966 158 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 POLR2LP62875 67 aaKnown RBP8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 E2F1Q01094 437 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 SLC25A11Q02978 314 aaKnown RBP8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 CYP4F3Q08477 520 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 SLC10A7Q0GE19 358 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 EIF2B5Q13144 721 aaKnown RBP8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 TRIM14Q14142 442 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 KRT81Q14533 505 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 ZNF235Q14590 738 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 LRRC14Q15048 493 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 IRF4Q15306 451 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 HADHQ16836 314 aaKnown RBP8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 TPRG1LQ5T0D9 272 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 TXNRD3NBQ6F5E7 133 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 MACC1Q6ZN28 852 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 ZSWIM9Q86XI8 627 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 BBS5Q8N3I7 341 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 FAM181AQ8N9Y4 354 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 ZNF564Q8TBZ8 553 aaPredicted RBP8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 LMX1AQ8TE12 382 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 RFFLQ8WZ73 363 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 ECHDC3Q96DC8 303 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 NXPE2Q96DL1 559 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 APOLD1Q96LR9 279 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 ZNF599Q96NL3 588 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 PSKH2Q96QS6 385 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 PCDH18Q9HCL0 1135 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 ETNK2Q9NVF9 386 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 EVA1BQ9NVM1 165 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 DKK4Q9UBT3 224 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 SEPT3Q9UH03 358 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 APOBEC3BQ9UH17 382 aaKnown RBP8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 KLF15Q9UIH9 416 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 ATP8A1Q9Y2Q0 1164 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 CSNK1G3Q9Y6M4 447 aa8.54□□□□□ -1.04
HMGXB4-207ENST00000498212 ZFC3H1O60293 1989 aaKnown RBP8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 ASPMQ8IZT6 3477 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 TMEM110-MUSTN1A8MSY1 372 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 TRAFD1O14545 582 aaPredicted RBP8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 LZTS3O60299 673 aaPredicted RBP8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 MAFKO60675 156 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 PEX11BO96011 259 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 GP1BAP07359 652 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 TPM1P09493 284 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 H2AFZP0C0S5 128 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 ELFN1P0C7U0 828 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 GJC1P36383 396 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 HSPA9P38646 679 aaKnown RBP8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 LIG3P49916 1009 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 PEX5P50542 639 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 INSM1Q01101 510 aaPredicted RBP8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 SEMG2Q02383 582 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 PPARDQ03181 441 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 TARDBPQ13148 414 aaKnown RBP eCLIP8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 AGERQ15109 404 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 SLC18A3Q16572 532 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 WSCD2Q2TBF2 565 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 DEFB133Q30KQ1 61 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 PRRT3Q5FWE3 981 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 FAXCQ5TGI0 409 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 SPECC1LQ69YQ0 1117 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 ZCCHC8Q6NZY4 707 aaKnown RBP8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 H2AFVQ71UI9 128 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 PHACTR4Q8IZ21 702 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 RBFAQ8N0V3 343 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 CACTIN-AS1Q8N1I8 211 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 ATPAF2Q8N5M1 289 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 OR8K1Q8NGG5 319 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 NSMCE1Q8WV22 266 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 CTNNBL1Q8WYA6 563 aaPredicted RBP8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 TBATAQ96M53 351 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 NUDCD1Q96RS6 583 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 IL12RB2Q99665 862 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 SLC13A1Q9BZW2 595 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 TCEAL2Q9H3H9 227 aaPredicted RBP8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 DEF6Q9H4E7 631 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 USP29Q9HBJ7 922 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 CTTNBP2NLQ9P2B4 639 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 RCOR3Q9P2K3 495 aaPredicted RBP8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 UVRAGQ9P2Y5 699 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 SPASTQ9UBP0 616 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 PNMA8BQ9ULN7 279 aaPredicted RBP8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 NENFQ9UMX5 172 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 CLCA2Q9UQC9 943 aa8.53□□□□□ -1.04
HMGXB4-207ENST00000498212 RP1P56715 2156 aa8.52□□□□□ -1.04
HMGXB4-207ENST00000498212 EPG5Q9HCE0 2579 aa8.52□□□□□ -1.05
HMGXB4-207ENST00000498212 LY6G6EA0A0G2JKS1 128 aa8.52□□□□□ -1.05
HMGXB4-207ENST00000498212 A0A1W2PQ67 120 aa8.52□□□□□ -1.05
HMGXB4-207ENST00000498212 SSU72P8A0A1W2PR75 194 aa8.52□□□□□ -1.05
HMGXB4-207ENST00000498212 TTC24A2A3L6 582 aaPredicted RBP8.52□□□□□ -1.05
HMGXB4-207ENST00000498212 CFAP69A5D8W1 941 aa8.52□□□□□ -1.05
HMGXB4-207ENST00000498212 TPP1O14773 563 aa8.52□□□□□ -1.05
HMGXB4-207ENST00000498212 SOCS5O75159 536 aa8.52□□□□□ -1.05
HMGXB4-207ENST00000498212 PCCBP05166 539 aa8.52□□□□□ -1.05
HMGXB4-207ENST00000498212 CD48P09326 243 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms