RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 IL17REQ8NFR9 667 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 ELP5Q8TE02 316 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 TMEM170AQ8WVE7 144 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 NUDCD2Q8WVJ2 157 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 HDAC2Q92769 488 aaKnown RBP3.4□□□□□ -1.87
PSPC1-205ENST00000497722 TXNDC15Q96J42 360 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 MVB12BQ9H7P6 319 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 OLA1Q9NTK5 396 aaKnown RBP3.4□□□□□ -1.87
PSPC1-205ENST00000497722 TMEM51Q9NW97 253 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 IL36RNQ9UBH0 155 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 NDRG3Q9UGV2 375 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 PGAP2Q9UHJ9 254 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.4□□□□□ -1.87
PSPC1-205ENST00000497722 AAR2Q9Y312 384 aaKnown RBP3.4□□□□□ -1.87
PSPC1-205ENST00000497722 PTGDR2Q9Y5Y4 395 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 A0A1B0GVT2 93 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.39□□□□□ -1.87
PSPC1-205ENST00000497722 INAFM1C9JVW0 142 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 KLRF2D3W0D1 207 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 EBAG9O00559 213 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 RGS14O43566 566 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 SPRY3O43610 288 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 SERPINI2O75830 405 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 F9P00740 461 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 HOXC6P09630 235 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 FGF3P11487 239 aaPredicted RBP3.39□□□□□ -1.87
PSPC1-205ENST00000497722 TNFAIP3P21580 790 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 MT3P25713 68 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 NFKBIAP25963 317 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 C21orf33P30042 268 aaPredicted RBP3.39□□□□□ -1.87
PSPC1-205ENST00000497722 CENPAP49450 140 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 PCYT1AP49585 367 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 CCR9P51686 369 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 NUDT6P53370 316 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 PMS2P54278 862 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 ABATP80404 500 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 DCTN2Q13561 401 aaKnown RBP3.39□□□□□ -1.87
PSPC1-205ENST00000497722 PKP1Q13835 747 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 HLFQ16534 295 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 DUSP6Q16828 381 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 TCTN1Q2MV58 587 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 LRRC8EQ6NSJ5 796 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 Q6ZTC4 211 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 DIS3L2Q8IYB7 885 aaKnown RBP3.39□□□□□ -1.87
PSPC1-205ENST00000497722 RBFAQ8N0V3 343 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 PDILTQ8N807 584 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 CADM4Q8NFZ8 388 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 ETNPPLQ8TBG4 499 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 MTBPQ96DY7 904 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 MXRA8Q9BRK3 442 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 DCLK3Q9C098 648 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 PRKRIP1Q9H875 184 aaPredicted RBP3.39□□□□□ -1.87
PSPC1-205ENST00000497722 SMYD2Q9NRG4 433 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 PCDHB16Q9NRJ7 776 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 CYSLTR2Q9NS75 346 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 ANKRD10Q9NXR5 420 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 CISD1Q9NZ45 108 aaKnown RBP3.39□□□□□ -1.87
PSPC1-205ENST00000497722 WNT16Q9UBV4 365 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 SLC25A10Q9UBX3 287 aaPredicted RBP3.39□□□□□ -1.87
PSPC1-205ENST00000497722 AASSQ9UDR5 926 aa3.39□□□□□ -1.87
PSPC1-205ENST00000497722 TCF20Q9UGU0 1960 aaKnown RBP3.39□□□□□ -1.87
PSPC1-205ENST00000497722 HSPB2A8KAH6 182 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 I6L893 689 aaPredicted RBP3.38□□□□□ -1.87
PSPC1-205ENST00000497722 KRT86O43790 486 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 TBX18O95935 607 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 MT-CYBP00156 380 aaPredicted RBP3.38□□□□□ -1.87
PSPC1-205ENST00000497722 TGFB3P10600 412 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 UBL4AP11441 157 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 CD58P19256 250 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 ARL3P36405 182 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 THPOP40225 353 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 SORDQ00796 357 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 FAM27E3Q08E93 113 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 TRAF2Q12933 501 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 GPS2Q13227 327 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 KRT32Q14532 448 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 KRT81Q14533 505 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 PLCB4Q15147 1175 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 HSPB2Q16082 182 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 TSTQ16762 297 aaKnown RBP3.38□□□□□ -1.87
PSPC1-205ENST00000497722 ESCO2Q56NI9 601 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 HAUS3Q68CZ6 603 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 CAPRIN2Q6IMN6 1127 aaKnown RBP3.38□□□□□ -1.87
PSPC1-205ENST00000497722 TSSK4Q6SA08 328 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 KLHL24Q6TFL4 600 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 DSTYKQ6XUX3 929 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 Q6ZSV7 163 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 NEK10Q6ZWH5 1172 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 SFTPA2Q8IWL1 248 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 DSELQ8IZU8 1212 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 SCCPDHQ8NBX0 429 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 MCPH1Q8NEM0 835 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 PPHLN1Q8NEY8 458 aaKnown RBP3.38□□□□□ -1.87
PSPC1-205ENST00000497722 METTL6Q8TCB7 284 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 KCNG4Q8TDN1 519 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 FBXL8Q96CD0 374 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 MED30Q96HR3 178 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 TIGD1Q96MW7 591 aa3.38□□□□□ -1.87
PSPC1-205ENST00000497722 MMTAG2Q9BU76 263 aaKnown RBP3.38□□□□□ -1.87
PSPC1-205ENST00000497722 SEZ6LQ9BYH1 1024 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms