RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 C21orf59P57076 290 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 IFI35P80217 286 aaPredicted RBP11.56□□□□□ -0.56
HLA-B-254ENST00000497377 SGCGQ13326 291 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 SLC14A1Q13336 389 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 STAT4Q14765 748 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 LAPTM4AQ15012 233 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 UGP2Q16851 508 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 ERAP2Q6P179 960 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 NT5DC3Q86UY8 548 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 CAMK1DQ8IU85 385 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 PGBD5Q8N414 524 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 MINDY1Q8N5J2 469 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 UBL4BQ8N7F7 174 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 PAF1Q8N7H5 531 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 KRT35Q92764 455 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 P3H4Q92791 437 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 SLC6A18Q96N87 628 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 OLFM3Q96PB7 478 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 GTPBP2Q9BX10 602 aaKnown RBP11.56□□□□□ -0.56
HLA-B-254ENST00000497377 C1QTNF7Q9BXJ2 289 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 SLC17A9Q9BYT1 436 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 EBF2Q9HAK2 575 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 NT5MQ9NPB1 228 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 RBM22Q9NW64 420 aaKnown RBP eCLIP11.56□□□□□ -0.56
HLA-B-254ENST00000497377 TRIM10Q9UDY6 481 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 ZFR2Q9UPR6 939 aaKnown RBP11.56□□□□□ -0.56
HLA-B-254ENST00000497377 ANKRD6Q9Y2G4 727 aa11.56□□□□□ -0.56
HLA-B-254ENST00000497377 DOCK9Q9BZ29 2069 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 A0A1B0GVT2 93 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 A0A1W2PR77 199 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 CFAP69A5D8W1 941 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 C4orf47A7E2U8 309 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 TRAFD1O14545 582 aaPredicted RBP11.55□□□□□ -0.56
HLA-B-254ENST00000497377 SLC31A1O15431 190 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 OPHN1O60890 802 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 ZNF883P0CG24 379 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 KRT10P13645 584 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 CA4P22748 312 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 MARCKSL1P49006 195 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 PEX5P50542 639 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 DYNLT1P63172 113 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 TMEM52BQ4KMG9 183 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 KAZNQ674X7 775 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 SEL1L3Q68CR1 1132 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 BBS12Q6ZW61 710 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 OXR1Q8N573 874 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 TMEM145Q8NBT3 493 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 DENND6BQ8NEG7 585 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 CXorf40AQ8TE69 158 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 LENG8Q96PV6 779 aaPredicted RBP11.55□□□□□ -0.56
HLA-B-254ENST00000497377 LGMNQ99538 433 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 IL12RB2Q99665 862 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 C1QTNF2Q9BXJ5 285 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 ERVMER34-1Q9H9K5 563 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 NOD2Q9HC29 1040 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 PCDH12Q9NPG4 1184 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 ATP8A1Q9Y2Q0 1164 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 HS3ST3A1Q9Y663 406 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 SLCO1B1Q9Y6L6 691 aa11.55□□□□□ -0.56
HLA-B-254ENST00000497377 IGLON5A6NGN9 336 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 HACD1B0YJ81 288 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 APOC4-APOC2K7ER74 178 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 TLR4O00206 839 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 TM4SF5O14894 197 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 YKT6O15498 198 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 SPINT1O43278 529 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 ZNF189O75820 626 aaPredicted RBP11.54□□□□□ -0.56
HLA-B-254ENST00000497377 TM7SF2O76062 418 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 TJP3O95049 919 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 APOC2P02655 101 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 PRLRP16471 622 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 MMP12P39900 470 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 CTSKP43235 329 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 MAXP61244 160 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 CCZ1BP86790 482 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 CCZ1P86791 482 aaPredicted RBP11.54□□□□□ -0.56
HLA-B-254ENST00000497377 BNC1Q01954 994 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 ITKQ08881 620 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 AP1B1Q10567 949 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 XRCC4Q13426 336 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 PRKD1Q15139 912 aaPredicted RBP11.54□□□□□ -0.56
HLA-B-254ENST00000497377 KIF19Q2TAC6 998 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 ARMC12Q5T9G4 340 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 NPNTQ6UXI9 565 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 DCP2Q8IU60 420 aaKnown RBP11.54□□□□□ -0.56
HLA-B-254ENST00000497377 NDUFAF2Q8N183 169 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 TFB1MQ8WVM0 346 aaKnown RBP11.54□□□□□ -0.56
HLA-B-254ENST00000497377 SEMA3CQ99985 751 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 FERMT1Q9BQL6 677 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 OSBPL8Q9BZF1 889 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 GAREM1Q9H706 876 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 FSCN3Q9NQT6 498 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 GDF3Q9NR23 364 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 PHTF1Q9UMS5 762 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 GUCA1BQ9UMX6 200 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 ITM2BQ9Y287 266 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 PCDHB3Q9Y5E6 796 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 PCDHGB2Q9Y5G2 931 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 KNL1Q8NG31 2342 aa11.54□□□□□ -0.56
HLA-B-254ENST00000497377 TP53BP1Q12888 1972 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms