RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 TYW5A2RUC4 315 aaKnown RBP5.51□□□□□ -1.53
MDM2-220ENST00000496959 TIMM23O14925 209 aa5.51□□□□□ -1.53
MDM2-220ENST00000496959 TTKP33981 857 aa5.51□□□□□ -1.53
MDM2-220ENST00000496959 MYBPHQ13203 477 aa5.51□□□□□ -1.53
MDM2-220ENST00000496959 ZNF718Q3SXZ3 478 aa5.51□□□□□ -1.53
MDM2-220ENST00000496959 ZNF672Q499Z4 452 aaPredicted RBP5.51□□□□□ -1.53
MDM2-220ENST00000496959 CCDC105Q8IYK2 499 aa5.51□□□□□ -1.53
MDM2-220ENST00000496959 GDPD5Q8WTR4 605 aa5.51□□□□□ -1.53
MDM2-220ENST00000496959 COG8Q96MW5 612 aa5.51□□□□□ -1.53
MDM2-220ENST00000496959 STN1Q9H668 368 aaKnown RBP5.51□□□□□ -1.53
MDM2-220ENST00000496959 OR6C3Q9NZP0 311 aa5.51□□□□□ -1.53
MDM2-220ENST00000496959 COMMD10Q9Y6G5 202 aa5.51□□□□□ -1.53
MDM2-220ENST00000496959 CEP170BQ9Y4F5 1589 aaPredicted RBP5.5□□□□□ -1.53
MDM2-220ENST00000496959 TCF20Q9UGU0 1960 aaKnown RBP5.5□□□□□ -1.53
MDM2-220ENST00000496959 PEX12O00623 359 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 KRT36O76013 467 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 HDAC4P56524 1084 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 ARL4CP56559 192 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 POU5F1BQ06416 359 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 TBL3Q12788 808 aaKnown RBP5.5□□□□□ -1.53
MDM2-220ENST00000496959 SNTA1Q13424 505 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 BIRC2Q13490 618 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 LURAP1LQ8IV03 231 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 HERC6Q8IVU3 1022 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 SFTPA2Q8IWL1 248 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 CPXM2Q8N436 756 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 SPATA5Q8NB90 893 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 RAB40AQ8WXH6 277 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 CNOT9Q92600 299 aaKnown RBP5.5□□□□□ -1.53
MDM2-220ENST00000496959 MTBPQ96DY7 904 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 LRFN5Q96NI6 719 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 RPS6KC1Q96S38 1066 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 CD180Q99467 661 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 ALKBH4Q9NXW9 302 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 MALT1Q9UDY8 824 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 PCDHGB5Q9Y5G0 923 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 LRRIQ1Q96JM4 1722 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 PLXNC1O60486 1568 aa5.5□□□□□ -1.53
MDM2-220ENST00000496959 CPS1P31327 1500 aa5.49□□□□□ -1.53
MDM2-220ENST00000496959 C17orf113A0A1B0GUU1 675 aa5.49□□□□□ -1.53
MDM2-220ENST00000496959 ARHGAP10A1A4S6 786 aa5.49□□□□□ -1.53
MDM2-220ENST00000496959 VWA3AA6NCI4 1184 aa5.49□□□□□ -1.53
MDM2-220ENST00000496959 SH2D7A6NKC9 451 aaPredicted RBP5.49□□□□□ -1.53
MDM2-220ENST00000496959 EBAG9O00559 213 aa5.49□□□□□ -1.53
MDM2-220ENST00000496959 LDHAP00338 332 aaKnown RBP5.49□□□□□ -1.53
MDM2-220ENST00000496959 CNPP09543 421 aaKnown RBP5.49□□□□□ -1.53
MDM2-220ENST00000496959 ZNF8P17098 575 aaPredicted RBP5.49□□□□□ -1.53
MDM2-220ENST00000496959 BLKP51451 505 aa5.49□□□□□ -1.53
MDM2-220ENST00000496959 DDR1Q08345 913 aa5.49□□□□□ -1.53
MDM2-220ENST00000496959 FAM76BQ5HYJ3 339 aa5.49□□□□□ -1.53
MDM2-220ENST00000496959 RHBDF2Q6PJF5 856 aa5.49□□□□□ -1.53
MDM2-220ENST00000496959 TBC1D20Q96BZ9 403 aa5.49□□□□□ -1.53
MDM2-220ENST00000496959 NDRG3Q9UGV2 375 aa5.49□□□□□ -1.53
MDM2-220ENST00000496959 FYCO1Q9BQS8 1478 aa5.49□□□□□ -1.53
MDM2-220ENST00000496959 SAMD9LQ8IVG5 1584 aa5.49□□□□□ -1.53
MDM2-220ENST00000496959 INO80Q9ULG1 1556 aaPredicted RBP5.49□□□□□ -1.53
MDM2-220ENST00000496959 CLTCQ00610 1675 aaKnown RBP5.49□□□□□ -1.53
MDM2-220ENST00000496959 ATP7AQ04656 1500 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 TCOF1Q13428 1488 aaKnown RBP5.48□□□□□ -1.53
MDM2-220ENST00000496959 ARHGAP35Q9NRY4 1499 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 SAA2-SAA4A0A096LPE2 208 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 MAGEA13PA6NCF6 341 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 KLK10O43240 276 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 BUB3O43684 328 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 CEP104O60308 925 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 TSPAN3O60637 253 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 ATP2C2O75185 946 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 KRTAP10-7P60409 375 aaPredicted RBP5.48□□□□□ -1.53
MDM2-220ENST00000496959 YWHAZP63104 245 aaKnown RBP5.48□□□□□ -1.53
MDM2-220ENST00000496959 DLG1Q12959 904 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 RUNX2Q13950 521 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 EFR3AQ14156 821 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 CES5AQ6NT32 575 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 CCDC129Q6ZRS4 1044 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 PGBD5Q8N414 524 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 ZNF114Q8NC26 417 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 RFWD2Q8NHY2 731 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 WFIKKN2Q8TEU8 576 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 NR4A3Q92570 626 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 BICD1Q96G01 975 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 OR1F2PQ96R84 312 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.48□□□□□ -1.53
MDM2-220ENST00000496959 LMAN2LQ9H0V9 348 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 SLC32A1Q9H598 525 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 GAREM1Q9H706 876 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 CASKIN1Q8WXD9 1431 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 KIAA1107Q9UPP5 1409 aa5.48□□□□□ -1.53
MDM2-220ENST00000496959 SYNMO15061 1565 aa5.47□□□□□ -1.53
MDM2-220ENST00000496959 J3KR12 359 aa5.47□□□□□ -1.53
MDM2-220ENST00000496959 PER2O15055 1255 aa5.47□□□□□ -1.53
MDM2-220ENST00000496959 TCEA3O75764 348 aa5.47□□□□□ -1.53
MDM2-220ENST00000496959 GAGE7O76087 117 aa5.47□□□□□ -1.53
MDM2-220ENST00000496959 MTA2O94776 668 aa5.47□□□□□ -1.53
MDM2-220ENST00000496959 DDNO94850 711 aaPredicted RBP5.47□□□□□ -1.53
MDM2-220ENST00000496959 GAGE12FP0CL80 117 aa5.47□□□□□ -1.53
MDM2-220ENST00000496959 GAGE12GP0CL81 117 aa5.47□□□□□ -1.53
MDM2-220ENST00000496959 GAGE12IP0CL82 117 aa5.47□□□□□ -1.53
MDM2-220ENST00000496959 GAGE1Q13065 139 aa5.47□□□□□ -1.53
MDM2-220ENST00000496959 GAGE4Q13068 117 aa5.47□□□□□ -1.53
MDM2-220ENST00000496959 DHX34Q14147 1143 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms