RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 CFAP58Q5T655 872 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 FAM46CQ5VWP2 391 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 ZNF776Q68DI1 518 aaPredicted RBP18.39■□□□□ 0.53
RGP1-202ENST00000496906 CCNI2Q6ZMN8 369 aaPredicted RBP18.39■□□□□ 0.53
RGP1-202ENST00000496906 GSPT2Q8IYD1 628 aaKnown RBP18.39■□□□□ 0.53
RGP1-202ENST00000496906 DNAAF3Q8N9W5 541 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 ARRDC3Q96B67 414 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 RMDN1Q96DB5 314 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 FMO2Q99518 471 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 TECTAO75443 2155 aa18.39■□□□□ 0.53
RGP1-202ENST00000496906 C16orf96A6NNT2 1141 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 ANKRD66B4E2M5 251 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 AP3B1O00203 1094 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 AVILO75366 819 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 ADH1BP00325 375 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 TUBBP07437 444 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 ALADP13716 330 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 MCM3P25205 808 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 ARL4CP56559 192 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 RPS14P62263 151 aaKnown RBP18.38■□□□□ 0.53
RGP1-202ENST00000496906 PARS2Q7L3T8 475 aaKnown RBP18.38■□□□□ 0.53
RGP1-202ENST00000496906 TMPRSS6Q8IU80 811 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 PAF1Q8N7H5 531 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 PPP1R16AQ96I34 528 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 FOXP3Q9BZS1 431 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 C2orf42Q9NWW7 574 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 MTRF1LQ9UGC7 380 aaKnown RBP18.38■□□□□ 0.53
RGP1-202ENST00000496906 PHTF1Q9UMS5 762 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 TCRBV21S2A2A0A5A6 115 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 SLC8A1P32418 973 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 DGKEP52429 567 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 EPHB1P54762 984 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 SESN2P58004 480 aaPredicted RBP18.38■□□□□ 0.53
RGP1-202ENST00000496906 CBLBQ13191 982 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 MSLNQ13421 630 aaPredicted RBP18.38■□□□□ 0.53
RGP1-202ENST00000496906 MSS51Q4VC12 460 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 CACUL1Q86Y37 369 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 PDIK1LQ8N165 341 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 PHACTR1Q9C0D0 580 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 SLC6A17Q9H1V8 727 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 PPIL1Q9Y3C6 166 aa18.38■□□□□ 0.53
RGP1-202ENST00000496906 A0A0J9YYE9 177 aa18.37■□□□□ 0.53
RGP1-202ENST00000496906 E7ESA3 106 aa18.37■□□□□ 0.53
RGP1-202ENST00000496906 MID1O15344 667 aa18.37■□□□□ 0.53
RGP1-202ENST00000496906 TRBC1P01850 177 aa18.37■□□□□ 0.53
RGP1-202ENST00000496906 DCNP07585 359 aaKnown RBP18.37■□□□□ 0.53
RGP1-202ENST00000496906 TPH1P17752 444 aa18.37■□□□□ 0.53
RGP1-202ENST00000496906 C5AR1P21730 350 aa18.37■□□□□ 0.53
RGP1-202ENST00000496906 POLR2LP62875 67 aaKnown RBP18.37■□□□□ 0.53
RGP1-202ENST00000496906 UGP2Q16851 508 aa18.37■□□□□ 0.53
RGP1-202ENST00000496906 AGGF1Q8N302 714 aaeCLIP18.37■□□□□ 0.53
RGP1-202ENST00000496906 SPEM1Q8N4L4 309 aa18.37■□□□□ 0.53
RGP1-202ENST00000496906 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.37■□□□□ 0.53
RGP1-202ENST00000496906 MRGPRX1Q96LB2 322 aa18.37■□□□□ 0.53
RGP1-202ENST00000496906 SMIM14Q96QK8 99 aa18.37■□□□□ 0.53
RGP1-202ENST00000496906 MCCC1Q96RQ3 725 aaPredicted RBP18.37■□□□□ 0.53
RGP1-202ENST00000496906 IER2Q9BTL4 223 aa18.37■□□□□ 0.53
RGP1-202ENST00000496906 POLMQ9NP87 494 aaPredicted RBP18.37■□□□□ 0.53
RGP1-202ENST00000496906 DLGAP2Q9P1A6 1054 aa18.37■□□□□ 0.53
RGP1-202ENST00000496906 TMEM221A6NGB7 291 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 UPK3BL1B0FP48 263 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 UPK3BL2E5RIL1 263 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 M0R296 226 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 BANF1O75531 89 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 PRKCGP05129 697 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 TIMP2P16035 220 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 NDUFV2P19404 249 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 MGAT1P26572 445 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 DRD3P35462 400 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 MAGEA9P43362 315 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 NPY2RP49146 381 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 DHX9Q08211 1270 aaKnown RBP18.36■□□□□ 0.53
RGP1-202ENST00000496906 DNAJC21Q5F1R6 531 aaKnown RBP18.36■□□□□ 0.53
RGP1-202ENST00000496906 CERCAMQ5T4B2 595 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 CENPUQ71F23 418 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 AADATQ8N5Z0 425 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 COL25A1Q9BXS0 654 aaPredicted RBP18.36■□□□□ 0.53
RGP1-202ENST00000496906 HDAC8Q9BY41 377 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 IL22Q9GZX6 179 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 DYRK4Q9NR20 520 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 BFARQ9NZS9 450 aa18.36■□□□□ 0.53
RGP1-202ENST00000496906 CAPN8A6NHC0 703 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 EIF3HO15372 352 aaKnown RBP eCLIP18.35■□□□□ 0.53
RGP1-202ENST00000496906 ALPIP09923 528 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 PIRTP0C851 137 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 CTPS1P17812 591 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 GABRG2P18507 467 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 AOC1P19801 751 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 NEK3P51956 506 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 ZBTB16Q05516 673 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 PDIA2Q13087 525 aaKnown RBP18.35■□□□□ 0.53
RGP1-202ENST00000496906 MTAPQ13126 283 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 PTPRRQ15256 657 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 BBS9Q3SYG4 887 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 LRRC73Q5JTD7 316 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 USP45Q70EL2 814 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 ERN2Q76MJ5 926 aaKnown RBP18.35■□□□□ 0.53
RGP1-202ENST00000496906 CCDC25Q86WR0 208 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 NDUFAF2Q8N183 169 aa18.35■□□□□ 0.53
RGP1-202ENST00000496906 MPP5Q8N3R9 675 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms