RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 NCKIPSDQ9NZQ3 722 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 CTTNBP2NLQ9P2B4 639 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 CSNK1G3Q9Y6M4 447 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 MYLKQ15746 1914 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.84■□□□□ 0.13
HDAC4-213ENST00000496347 A0A1W2PQ67 120 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 SCAMP1O15126 338 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 MUSKO15146 869 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 BUB1BO60566 1050 aaPredicted RBP15.84■□□□□ 0.13
HDAC4-213ENST00000496347 KRT37O76014 449 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 PROSCO94903 275 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 PEX11BO96011 259 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 CAPNS1P04632 268 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 CKMT1AP12532 417 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 AMPD1P23109 780 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 POLR2LP62875 67 aaKnown RBP15.84■□□□□ 0.13
HDAC4-213ENST00000496347 LRRC14Q15048 493 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 TSR1Q2NL82 804 aaKnown RBP15.84■□□□□ 0.13
HDAC4-213ENST00000496347 ASTE1Q2TB18 679 aaPredicted RBP15.84■□□□□ 0.13
HDAC4-213ENST00000496347 RALGPS1Q5JS13 557 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 ZSWIM9Q86XI8 627 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 PROSER1Q86XN7 944 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 NSMCE1Q8WV22 266 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 BTN2A2Q8WVV5 523 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 RFFLQ8WZ73 363 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 CCDC86Q9H6F5 360 aaKnown RBP15.84■□□□□ 0.13
HDAC4-213ENST00000496347 ABHD10Q9NUJ1 306 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 ETNK2Q9NVF9 386 aa15.84■□□□□ 0.13
HDAC4-213ENST00000496347 TRAFD1O14545 582 aaPredicted RBP15.83■□□□□ 0.12
HDAC4-213ENST00000496347 AKR1B10O60218 316 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 MAFKO60675 156 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 KRT7P08729 469 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 TMEM253P0C7T8 217 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 JUNDP17535 347 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 CR2P20023 1033 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 NFKBIAP25963 317 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 SSR1P43307 286 aaKnown RBP15.83■□□□□ 0.12
HDAC4-213ENST00000496347 PEX5P50542 639 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 SCNN1BP51168 640 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 DAB2P98082 770 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 SLC10A7Q0GE19 358 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 DPYSL3Q14195 570 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 TPRG1LQ5T0D9 272 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 HES3Q5TGS1 186 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 ZCCHC8Q6NZY4 707 aaKnown RBP15.83■□□□□ 0.12
HDAC4-213ENST00000496347 CNGA4Q8IV77 575 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 TP53INP2Q8IXH6 220 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 PAF1Q8N7H5 531 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 PDCD7Q8N8D1 485 aaKnown RBP15.83■□□□□ 0.12
HDAC4-213ENST00000496347 NXPE2Q96DL1 559 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 NUDCD1Q96RS6 583 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 APOBEC3BQ9UH17 382 aaKnown RBP15.83■□□□□ 0.12
HDAC4-213ENST00000496347 NBEAQ8NFP9 2946 aa15.83■□□□□ 0.12
HDAC4-213ENST00000496347 FAM149AA5PLN7 773 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 SRRM3A6NNA2 597 aaPredicted RBP15.82■□□□□ 0.12
HDAC4-213ENST00000496347 TMEM110-MUSTN1A8MSY1 372 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 K7ESM1 405 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 TPP1O14773 563 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 AQP9O43315 295 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 HTRA2O43464 458 aaPredicted RBP15.82■□□□□ 0.12
HDAC4-213ENST00000496347 MFSD11O43934 449 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 GP1BAP07359 652 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 ELFN1P0C7U0 828 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 GIMD1P0DJR0 217 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 ITIH2P19823 946 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 HTR1BP28222 390 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 MMP13P45452 471 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 LIG3P49916 1009 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 ARSEP51690 589 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 GALNT2Q10471 571 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 RALGDSQ12967 914 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 EIF2B5Q13144 721 aaKnown RBP15.82■□□□□ 0.12
HDAC4-213ENST00000496347 MTM1Q13496 603 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 CAMK2BQ13554 666 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 PDK2Q15119 407 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 ZNF542PQ5EBM4 170 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 DPPA4Q7L190 304 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 PHACTR4Q8IZ21 702 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 CACTIN-AS1Q8N1I8 211 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 RNF214Q8ND24 703 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 ATL2Q8NHH9 583 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 FATE1Q969F0 183 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 FAF2Q96CS3 445 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 PACSIN1Q9BY11 444 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 HAUS2Q9NVX0 235 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 SPASTQ9UBP0 616 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 KLF15Q9UIH9 416 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 ASXL3Q9C0F0 2248 aa15.82■□□□□ 0.12
HDAC4-213ENST00000496347 LZTS3O60299 673 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-213ENST00000496347 CD48P09326 243 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 IL4RP24394 825 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 GJC1P36383 396 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 GARSP41250 739 aaKnown RBP15.81■□□□□ 0.12
HDAC4-213ENST00000496347 BLKP51451 505 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 DUSP3P51452 185 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-213ENST00000496347 E2F1Q01094 437 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 NFATC4Q14934 902 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 PAFAH1B3Q15102 231 aaKnown RBP15.81■□□□□ 0.12
HDAC4-213ENST00000496347 WSCD2Q2TBF2 565 aa15.81■□□□□ 0.12
HDAC4-213ENST00000496347 MARC1Q5VT66 337 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms