RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	RHBDL2	Q9NX52	303 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MPP6	Q9NZW5	540 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SFMBT1	Q9UHJ3	866 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RNF103-CHMP3	A0A140T963	221 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PAGE1	O75459	146 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	H6PD	O95479	791 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	DNAJB1	P25685	340 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SOX11	P35716	441 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	FAM219B	Q5XKK7	198 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CNTN4	Q8IWV2	1026 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TMEM86A	Q8N2M4	240 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RIN3	Q8TB24	985 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PABPC5	Q96DU9	382 aa	Known RBP	13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SLC29A1	Q99808	456 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TNFRSF12A	Q9NP84	129 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RSL24D1	Q9UHA3	163 aa	Known RBP	13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PTCH2	Q9Y6C5	1203 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071		C9JVG2	144 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	FBP2	O00757	339 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MATN3	O15232	486 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PCSK6	P29122	969 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SLC7A1	P30825	629 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	DNAJB13	P59910	316 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MAX	P61244	160 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TECRL	Q5HYJ1	363 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PM20D1	Q6GTS8	502 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	DENND5A	Q6IQ26	1287 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	LIMS2	Q7Z4I7	341 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ZNF786	Q8N393	782 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	FAM47B	Q8NA70	645 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	HASPIN	Q8TF76	798 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	FCRL2	Q96LA5	508 aa	Predicted RBP	13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	KATNBL1	Q9H079	304 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	LIN28A	Q9H9Z2	209 aa	Known RBP	13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	NT5M	Q9NPB1	228 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	IGSF5	Q9NSI5	407 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CDH9	Q9ULB4	789 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CNOT6	Q9ULM6	557 aa	Known RBP	13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	FAF1	Q9UNN5	650 aa	Predicted RBP	13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	INHBC	P55103	352 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ESRRG	P62508	458 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	LRP8	Q14114	963 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PSMD5	Q16401	504 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	GPR142	Q7Z601	462 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SLC22A9	Q8IVM8	553 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PELI3	Q8N2H9	469 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SCAMP5	Q8TAC9	235 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TSGA13	Q96PP4	275 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PNPLA3	Q9NST1	481 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	IPO11	Q9UI26	975 aa	Known RBP	13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CRYL1	Q9Y2S2	319 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PLXNA1	Q9UIW2	1896 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ANGPT2	O15123	496 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	AFF1	P51825	1210 aa	Known RBP	13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CDH15	P55291	814 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TBCEL	Q5QJ74	424 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	GPR158	Q5T848	1215 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	IFNE	Q86WN2	208 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	METTL23	Q86XA0	190 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PTCD2	Q8WV60	388 aa	Known RBP	13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CANT1	Q8WVQ1	401 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ZNF512	Q96ME7	567 aa	Predicted RBP	13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TSPAN18	Q96SJ8	248 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	EGFL7	Q9UHF1	273 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	DSE	Q9UL01	958 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RNF11	Q9Y3C5	154 aa		13.5	□□□□□ -0.25
SUPT20H-222	ENST00000495071		M0QZ92	97 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MAFK	O60675	156 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CRCP	O75575	148 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	B3GAT3	O94766	335 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	C8B	P07358	591 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CDH2	P19022	906 aa	Predicted RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SLC5A2	P31639	672 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CCR1	P32246	355 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CLCN5	P51795	746 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CACNB2	Q08289	660 aa	Predicted RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	APOF	Q13790	326 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	XKR4	Q5GH76	650 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	HECTD2	Q5U5R9	776 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TIGD7	Q6NT04	549 aa	Predicted RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TFAP2D	Q7Z6R9	452 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CHERP	Q8IWX8	916 aa	Known RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	OR52K2	Q8NGK3	314 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TMIGD2	Q96BF3	282 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MEAF6	Q9HAF1	191 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	NDFIP2	Q9NV92	336 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TBC1D13	Q9NVG8	400 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CNOT11	Q9UKZ1	510 aa	Known RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PHF24	Q9UPV7	400 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	VWA7	Q9Y334	891 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	F2	P00734	622 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PENK	P01210	267 aa	Predicted RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PSEN2	P49810	448 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CRYBB1	P53674	252 aa	Predicted RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	DCTN2	Q13561	401 aa	Known RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TTC33	Q6PID6	262 aa	Predicted RBP	13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ARHGAP12	Q8IWW6	846 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	LZTR1	Q8N653	840 aa		13.49	□□□□□ -0.25
SUPT20H-222	ENST00000495071	GRIN3A	Q8TCU5	1115 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms