RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ZNF211Q13398 564 aaPredicted RBP10.69□□□□□ -0.7
NELFE-213ENST00000494956 DPYSL3Q14195 570 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 IHHQ14623 411 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 SLC18A3Q16572 532 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 CFAP58Q5T655 872 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 TMCO4Q5TGY1 634 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 PARGQ86W56 976 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 GALNT15Q8N3T1 639 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 PAF1Q8N7H5 531 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 DENND6BQ8NEG7 585 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 OR8K1Q8NGG5 319 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 LMX1AQ8TE12 382 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 PDCD6IPQ8WUM4 868 aaKnown RBP10.69□□□□□ -0.7
NELFE-213ENST00000494956 TEKT4Q8WW24 435 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 ASB12Q8WXK4 309 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 IQCDQ96DY2 449 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 TUBGCP5Q96RT8 1024 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 MFRPQ9BY79 579 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 DONSONQ9NYP3 566 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 ATP8A1Q9Y2Q0 1164 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 OR1A2Q9Y585 309 aa10.69□□□□□ -0.7
NELFE-213ENST00000494956 COL27A1Q8IZC6 1860 aaPredicted RBP10.68□□□□□ -0.7
NELFE-213ENST00000494956 ASXL3Q9C0F0 2248 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 TMEM8BA6NDV4 472 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 CBFA2T2O43439 604 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 LZTS3O60299 673 aaPredicted RBP10.68□□□□□ -0.7
NELFE-213ENST00000494956 MFAP3LO75121 409 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 JUPP14923 745 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 CR2P20023 1033 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 ACP1P24666 158 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 CSNK1DP48730 415 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 ZNF135P52742 658 aaPredicted RBP10.68□□□□□ -0.7
NELFE-213ENST00000494956 THOP1P52888 689 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 HNRNPKP61978 463 aaKnown RBP eCLIP10.68□□□□□ -0.7
NELFE-213ENST00000494956 INSM1Q01101 510 aaPredicted RBP10.68□□□□□ -0.7
NELFE-213ENST00000494956 ELP6Q0PNE2 266 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 TRAF2Q12933 501 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 TARDBPQ13148 414 aaKnown RBP eCLIP10.68□□□□□ -0.7
NELFE-213ENST00000494956 ZNF235Q14590 738 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 INPP5AQ14642 412 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 MESDQ14696 234 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 LRRC14Q15048 493 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 DENND2CQ68D51 928 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 NCBP2-AS2Q69YL0 99 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 BRAT1Q6PJG6 821 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 C19orf48Q6RUI8 117 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 CRTC1Q6UUV9 634 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 LIPIQ6XZB0 460 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 RD3Q7Z3Z2 195 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 PROSER1Q86XN7 944 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 DCP2Q8IU60 420 aaKnown RBP10.68□□□□□ -0.7
NELFE-213ENST00000494956 PHACTR4Q8IZ21 702 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 ATPAF2Q8N5M1 289 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 LZTR1Q8N653 840 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 KCTD6Q8NC69 237 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 PCDH19Q8TAB3 1148 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 TSACCQ96A04 125 aaPredicted RBP10.68□□□□□ -0.7
NELFE-213ENST00000494956 ECHDC3Q96DC8 303 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 ZNF641Q96N77 438 aaPredicted RBP10.68□□□□□ -0.7
NELFE-213ENST00000494956 PSKH2Q96QS6 385 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 CLPBQ9H078 707 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 DEF6Q9H4E7 631 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 CCDC86Q9H6F5 360 aaKnown RBP10.68□□□□□ -0.7
NELFE-213ENST00000494956 ATP13A3Q9H7F0 1226 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 NOD2Q9HC29 1040 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 NT5MQ9NPB1 228 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 ABHD10Q9NUJ1 306 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 B4GALT6Q9UBX8 382 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 SEPT3Q9UH03 358 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 APOBEC3BQ9UH17 382 aaKnown RBP10.68□□□□□ -0.7
NELFE-213ENST00000494956 RAXQ9Y2V3 346 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 HYOU1Q9Y4L1 999 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 PCDHGA1Q9Y5H4 931 aa10.68□□□□□ -0.7
NELFE-213ENST00000494956 RP1P56715 2156 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 AQP9O43315 295 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 AKR1B10O60218 316 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 RECQL5O94762 991 aaPredicted RBP10.67□□□□□ -0.7
NELFE-213ENST00000494956 PROSCO94903 275 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 TPM3P06753 285 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 PDHA1P08559 390 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 H2AFZP0C0S5 128 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 CTPS1P17812 591 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 MMP13P45452 471 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 NSUN2Q08J23 767 aaKnown RBP eCLIP10.67□□□□□ -0.7
NELFE-213ENST00000494956 SLC10A2Q12908 348 aaPredicted RBP10.67□□□□□ -0.7
NELFE-213ENST00000494956 RFTN1Q14699 578 aaPredicted RBP10.67□□□□□ -0.7
NELFE-213ENST00000494956 GRM3Q14832 879 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 CDKN3Q16667 212 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 HADHQ16836 314 aaKnown RBP10.67□□□□□ -0.7
NELFE-213ENST00000494956 ANKRD20A8PQ5CZ79 823 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 PRRT3Q5FWE3 981 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 FAXCQ5TGI0 409 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 ERAP2Q6P179 960 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 GUSBP11Q6P575 273 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 ENPP7Q6UWV6 458 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 H2AFVQ71UI9 128 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 B4GALNT4Q76KP1 1039 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 DPPA4Q7L190 304 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 TMPRSS12Q86WS5 348 aa10.67□□□□□ -0.7
NELFE-213ENST00000494956 HID1Q8IV36 788 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms