RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	ERAP2	Q6P179	960 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	ZSWIM9	Q86XI8	627 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	CAMK1D	Q8IU85	385 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	TP53INP2	Q8IXH6	220 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	CBARP	Q8N350	705 aa	Predicted RBP	10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	BBS5	Q8N3I7	341 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	SDR16C5	Q8N3Y7	309 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	EID2	Q8N6I1	236 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	PNPLA1	Q8N8W4	532 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	PCDH19	Q8TAB3	1148 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	BTN2A2	Q8WVV5	523 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	MAML1	Q92585	1016 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	CNDP2	Q96KP4	475 aa	Known RBP	10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	CCDC42	Q96M95	316 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	CHP1	Q99653	195 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	DUSP23	Q9BVJ7	150 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	PACSIN1	Q9BY11	444 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	DEF6	Q9H4E7	631 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	PCDH12	Q9NPG4	1184 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	KCTD5	Q9NXV2	234 aa		10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	ANKRD11	Q6UB99	2663 aa	Predicted RBP	10.36	□□□□□ -0.75
NEPRO-222	ENST00000494891	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891		H3BM21	787 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	LZTS3	O60299	673 aa	Predicted RBP	10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	MMP20	O60882	483 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	RFPL3	O75679	317 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	GP1BA	P07359	652 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	HOXC4	P09017	264 aa	Predicted RBP	10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	CD48	P09326	243 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	ALPPL2	P10696	532 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	CKMT1A	P12532	417 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	C6	P13671	934 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	XPA	P23025	273 aa	Predicted RBP	10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	CCNC	P24863	283 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	NFKBIA	P25963	317 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	IGFALS	P35858	605 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	GARS	P41250	739 aa	Known RBP	10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	SLC1A1	P43005	524 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	LIG3	P49916	1009 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	SCNN1B	P51168	640 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	ADK	P55263	362 aa	Known RBP	10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	CAMK2B	Q13554	666 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	KRT81	Q14533	505 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	ZNF235	Q14590	738 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	LRRC14	Q15048	493 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	ANKRD20A8P	Q5CZ79	823 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	MARC1	Q5VT66	337 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	NCBP2-AS2	Q69YL0	99 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	TIGD7	Q6NT04	549 aa	Predicted RBP	10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	MACC1	Q6ZN28	852 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	DPPA4	Q7L190	304 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	PTAR1	Q7Z6K3	402 aa	Predicted RBP	10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	RAVER1	Q8IY67	606 aa	Known RBP	10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	PGBD5	Q8N414	524 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	ATPAF2	Q8N5M1	289 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	NETO2	Q8NC67	525 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	SLC35G2	Q8TBE7	412 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	NSMCE3	Q96MG7	304 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	MYOC	Q99972	504 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	NCKIPSD	Q9NZQ3	722 aa		10.35	□□□□□ -0.75
NEPRO-222	ENST00000494891	GOLGA4	Q13439	2230 aa	Known RBP	10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	PSMD11	O00231	422 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	TRIM38	O00635	465 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	MATN3	O15232	486 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	SIGLEC6	O43699	453 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	FZD6	O60353	706 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	ITIH2	P19823	946 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	MX2	P20592	715 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	FECH	P22830	423 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	TRIM23	P36406	574 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	MMP13	P45452	471 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	TAS2R40	P59535	323 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	RALGDS	Q12967	914 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	EIF2B5	Q13144	721 aa	Known RBP	10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	MMRN1	Q13201	1228 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	MTM1	Q13496	603 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	PDE1C	Q14123	709 aa	Predicted RBP	10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	IFI16	Q16666	785 aa	Known RBP	10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	WSCD2	Q2TBF2	565 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	ATP13A4	Q4VNC1	1196 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	TPRG1L	Q5T0D9	272 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	CFAP58	Q5T655	872 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	LIPI	Q6XZB0	460 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	PQLC3	Q8N755	202 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	TC2N	Q8N9U0	490 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	KCTD6	Q8NC69	237 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	RNF214	Q8ND24	703 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	ZNF548	Q8NEK5	533 aa	Predicted RBP	10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	NSMCE1	Q8WV22	266 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	HDAC11	Q96DB2	347 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	MRFAP1L1	Q96HT8	127 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	MCCC1	Q96RQ3	725 aa	Predicted RBP	10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	NOD2	Q9HC29	1040 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	MBNL1	Q9NR56	388 aa	Known RBP	10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	HAUS2	Q9NVX0	235 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	UCKL1	Q9NWZ5	548 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	SALL4	Q9UJQ4	1053 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	PHTF1	Q9UMS5	762 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	CFAP47	Q6ZTR5	3102 aa		10.34	□□□□□ -0.75
NEPRO-222	ENST00000494891	DSP	P15924	2871 aa	Known RBP	10.34	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms