RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ARL4AP40617 200 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 CSNK1DP48730 415 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 HCAR3P49019 387 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 YPEL5P62699 121 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 ZBED6P86452 979 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 BCL2L1Q07817 233 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 DPYSQ14117 519 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 INPP5AQ14642 412 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 LBRQ14739 615 aaKnown RBP9.67□□□□□ -0.86
MSH5-218ENST00000494646 GRM3Q14832 879 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 LRRC14Q15048 493 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 IRF4Q15306 451 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 CDKN3Q16667 212 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 WSCD2Q2TBF2 565 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 ATP13A4Q4VNC1 1196 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 ERAP2Q6P179 960 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 ENPP7Q6UWV6 458 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 POLNQ7Z5Q5 900 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 HID1Q8IV36 788 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 PSTKQ8IV42 348 aaKnown RBP9.67□□□□□ -0.86
MSH5-218ENST00000494646 IFI44Q8TCB0 444 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 HCAR2Q8TDS4 363 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 TRIM11Q96F44 468 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 CRELD1Q96HD1 420 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 ZNF641Q96N77 438 aaPredicted RBP9.67□□□□□ -0.86
MSH5-218ENST00000494646 EIF3CQ99613 913 aaKnown RBP9.67□□□□□ -0.86
MSH5-218ENST00000494646 IL12RB2Q99665 862 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 APOOQ9BUR5 198 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 DUSP23Q9BVJ7 150 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 NUP85Q9BW27 656 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 C1QTNF7Q9BXJ2 289 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 CLPBQ9H078 707 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 ATP13A3Q9H7F0 1226 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.67□□□□□ -0.86
MSH5-218ENST00000494646 SPASTQ9UBP0 616 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 APOBEC3BQ9UH17 382 aaKnown RBP9.67□□□□□ -0.86
MSH5-218ENST00000494646 ANAPC7Q9UJX3 599 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 CAPN11Q9UMQ6 739 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 LUC7L2Q9Y383 392 aaKnown RBP9.67□□□□□ -0.86
MSH5-218ENST00000494646 PCDHB1Q9Y5F3 818 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 BZW2Q9Y6E2 419 aaKnown RBP9.67□□□□□ -0.86
MSH5-218ENST00000494646 U3KQA8 63 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 ARHGEF17Q96PE2 2063 aaPredicted RBP9.67□□□□□ -0.86
MSH5-218ENST00000494646 A0A1W2PQJ5 194 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 H3BRJ5 948 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 CASC3O15234 703 aaKnown RBP9.66□□□□□ -0.86
MSH5-218ENST00000494646 YY2O15391 372 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 TLX3O43711 291 aaPredicted RBP9.66□□□□□ -0.86
MSH5-218ENST00000494646 PCCBP05166 539 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 CELA2BP08218 269 aaPredicted RBP9.66□□□□□ -0.86
MSH5-218ENST00000494646 CD48P09326 243 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 CTSEP14091 401 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 TSHRP16473 764 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 SERPINA4P29622 427 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 CASP14P31944 242 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 DUSP3P51452 185 aaPredicted RBP9.66□□□□□ -0.86
MSH5-218ENST00000494646 SUOXP51687 545 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 PPARDQ03181 441 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 NSUN2Q08J23 767 aaKnown RBP eCLIP9.66□□□□□ -0.86
MSH5-218ENST00000494646 MMRN1Q13201 1228 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 PIGHQ14442 188 aaPredicted RBP9.66□□□□□ -0.86
MSH5-218ENST00000494646 ACAP1Q15027 740 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 DPYSL2Q16555 572 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 ALKBH5Q6P6C2 394 aaKnown RBP9.66□□□□□ -0.86
MSH5-218ENST00000494646 BRAT1Q6PJG6 821 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 TMCO3Q6UWJ1 677 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 EFL1Q7Z2Z2 1120 aaKnown RBP9.66□□□□□ -0.86
MSH5-218ENST00000494646 CPNE8Q86YQ8 564 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 PHACTR4Q8IZ21 702 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 LZTR1Q8N653 840 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 DCBLD1Q8N8Z6 715 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 FAM181AQ8N9Y4 354 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 PLA2G15Q8NCC3 412 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 MAPK15Q8TD08 544 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 PDCD6IPQ8WUM4 868 aaKnown RBP9.66□□□□□ -0.86
MSH5-218ENST00000494646 BTN2A2Q8WVV5 523 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 RFFLQ8WZ73 363 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 SYN2Q92777 582 aaPredicted RBP9.66□□□□□ -0.86
MSH5-218ENST00000494646 CSPG4P5Q96PW8 444 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 SLC13A1Q9BZW2 595 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 XPO4Q9C0E2 1151 aaKnown RBP9.66□□□□□ -0.86
MSH5-218ENST00000494646 PCDH18Q9HCL0 1135 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 GULP1Q9UBP9 304 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 DKK4Q9UBT3 224 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 IP6K2Q9UHH9 426 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 ATP8A1Q9Y2Q0 1164 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 OR1A2Q9Y585 309 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 PCDHGC4Q9Y5F7 938 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 CSNK1G3Q9Y6M4 447 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 LOC400499M0QZD8 3231 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 CACNA1GO43497 2377 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 LRP4O75096 1905 aa9.66□□□□□ -0.86
MSH5-218ENST00000494646 IGSF10Q6WRI0 2623 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 TSPAN11A1L157 253 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 MYO1FO00160 1098 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 BRINP1O60477 761 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 MAFKO60675 156 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 RECQL5O94762 991 aaPredicted RBP9.65□□□□□ -0.86
MSH5-218ENST00000494646 GYPCP04921 128 aa9.65□□□□□ -0.86
MSH5-218ENST00000494646 CYP1A2P05177 515 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms