RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 TMEM18Q96B42 140 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 ZNF333Q96JL9 665 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 APOLD1Q96LR9 279 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 CAMK1GQ96NX5 476 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 CDT1Q9H211 546 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 POLR1BQ9H9Y6 1135 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 SLC6A13Q9NSD5 602 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 DIAPH3Q9NSV4 1193 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 SIRT3Q9NTG7 399 aaPredicted RBP4.62□□□□□ -1.67
SMC4-224ENST00000494612 SPATS2LQ9NUQ6 558 aaKnown RBP4.62□□□□□ -1.67
SMC4-224ENST00000494612 POT1Q9NUX5 634 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 SEPT11Q9NVA2 429 aaKnown RBP4.62□□□□□ -1.67
SMC4-224ENST00000494612 NDRG3Q9UGV2 375 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 LIMA1Q9UHB6 759 aaKnown RBP4.62□□□□□ -1.67
SMC4-224ENST00000494612 FBXO9Q9UK97 447 aaPredicted RBP4.62□□□□□ -1.67
SMC4-224ENST00000494612 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.62□□□□□ -1.67
SMC4-224ENST00000494612 ZCCHC6Q5VYS8 1495 aaKnown RBP4.62□□□□□ -1.67
SMC4-224ENST00000494612 DCAF1Q9Y4B6 1507 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 IGLV5-39A0A0G2JS06 123 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 FAM90A8PA6NJQ4 464 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 I6L893 689 aaPredicted RBP4.61□□□□□ -1.67
SMC4-224ENST00000494612 MDM4O15151 490 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 SMAD6O43541 496 aaKnown RBP4.61□□□□□ -1.67
SMC4-224ENST00000494612 TMEM63AO94886 807 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 IFNA2P01563 188 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 FAM90A13PP0C7W8 464 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 FAM90A24PP0C7X0 464 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 PSG1P11464 419 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 PTPN2P17706 415 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 THPOP40225 353 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 CENPAP49450 140 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 ARF3P61204 181 aaPredicted RBP4.61□□□□□ -1.67
SMC4-224ENST00000494612 RPL7AP62424 266 aaKnown RBP4.61□□□□□ -1.67
SMC4-224ENST00000494612 OLR1P78380 273 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 ARF1P84077 181 aaKnown RBP4.61□□□□□ -1.67
SMC4-224ENST00000494612 TRAF1Q13077 416 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 HIST2H2ACQ16777 129 aaPredicted RBP4.61□□□□□ -1.67
SMC4-224ENST00000494612 SOWAHAQ2M3V2 549 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 ALG11Q2TAA5 492 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 PLEKHO1Q53GL0 409 aaPredicted RBP4.61□□□□□ -1.67
SMC4-224ENST00000494612 ESCO2Q56NI9 601 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 KLHL24Q6TFL4 600 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 CYP20A1Q6UW02 462 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 LCTLQ6UWM7 567 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 HAPLN4Q86UW8 402 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 ZDHHC23Q8IYP9 409 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 FRMD1Q8N878 549 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 MIGA1Q8NAN2 632 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 NLRP4Q96MN2 994 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 MXRA8Q9BRK3 442 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 H2AFJQ9BTM1 129 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 TKTL2Q9H0I9 626 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 TASP1Q9H6P5 420 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 BPIFA1Q9NP55 256 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 FZD3Q9NPG1 666 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 TBC1D22BQ9NU19 505 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 CARD8Q9Y2G2 431 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 SCINQ9Y6U3 715 aa4.61□□□□□ -1.67
SMC4-224ENST00000494612 KDM4EB2RXH2 506 aaPredicted RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 CHL1O00533 1208 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 EBAG9O00559 213 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 SEC14L5O43304 696 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 PTP4A3O75365 173 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 SEC14L2O76054 403 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 DDX58O95786 925 aaKnown RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 CRYABP02511 175 aaKnown RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 TFP02787 698 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 CYP1A2P05177 515 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 IRF1P10914 325 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 PCNAP12004 261 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 PPARGP37231 505 aaPredicted RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 RFX5P48382 616 aaPredicted RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 PIP4K2AP48426 406 aaPredicted RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 HTR6P50406 440 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 EIF5P55010 431 aaKnown RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 SELENOVP59797 346 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 SORDQ00796 357 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 MAMLD1Q13495 774 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 GPR18Q14330 331 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 FGFBP1Q14512 234 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 Q5PR19 223 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 DCAF12L2Q5VW00 463 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 FAM205BPQ63HN1 556 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 TXNDC8Q6A555 127 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 PARM1Q6UWI2 310 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 ZNF367Q7RTV3 350 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 TRAPPC11Q7Z392 1133 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 MB21D2Q8IYB1 491 aaPredicted RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 CCDC13Q8IYE1 715 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 RBMXL3Q8N7X1 1067 aaKnown RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 C7orf57Q8NEG2 295 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 MCPH1Q8NEM0 835 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 GABPB2Q8TAK5 448 aaPredicted RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 SLC35F5Q8WV83 523 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 PSPC1Q8WXF1 523 aaKnown RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 LPAR1Q92633 364 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 USP6NLQ92738 828 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 ZKSCAN4Q969J2 545 aaPredicted RBP4.6□□□□□ -1.67
SMC4-224ENST00000494612 SCPEP1Q9HB40 452 aa4.6□□□□□ -1.67
SMC4-224ENST00000494612 HAUS2Q9NVX0 235 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms