RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 ANO7Q6IWH7 933 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 USP49Q70CQ1 688 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 ZNF720Q7Z2F6 126 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 ADGRE4PQ86SQ3 457 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 TTC7BQ86TV6 843 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 RHOT1Q8IXI2 618 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 PQLC1Q8N2U9 271 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 PDCL2Q8N4E4 241 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 DEFB119Q8N690 84 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 DEFB124Q8NES8 71 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 TSTD1Q8NFU3 115 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 OR5M3Q8NGP4 307 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 RASSF8Q8NHQ8 419 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 POMGNT1Q8WZA1 660 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 RAD54LQ92698 747 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 SAAL1Q96ER3 474 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 MRGPRX4Q96LA9 322 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 NT5C1BQ96P26 610 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 LRRC37BQ96QE4 947 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 DPYSL5Q9BPU6 564 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 ACBD6Q9BR61 282 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 FAM213AQ9BRX8 229 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 SCNM1Q9BWG6 230 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 PANK2Q9BZ23 570 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 ZDHHC4Q9NPG8 344 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 LANCL2Q9NS86 450 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 TMEM74BQ9NUR3 256 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 DDX43Q9NXZ2 648 aaKnown RBP5.47□□□□□ -1.53
PTCD3-219ENST00000494323 CNOT11Q9UKZ1 510 aaKnown RBP5.47□□□□□ -1.53
PTCD3-219ENST00000494323 C2CD2Q9Y426 696 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 STYXL1Q9Y6J8 313 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 DUSP10Q9Y6W6 482 aa5.47□□□□□ -1.53
PTCD3-219ENST00000494323 GOLGA4Q13439 2230 aaKnown RBP5.47□□□□□ -1.53
PTCD3-219ENST00000494323 ANKRD11Q6UB99 2663 aaPredicted RBP5.46□□□□□ -1.54
PTCD3-219ENST00000494323 OBSL1O75147 1896 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 MYO16Q9Y6X6 1858 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 A0A088AWK7 358 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 A0A1W2PRX2 142 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 H3BQV1 296 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 K7ESM1 405 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 SLC16A6O15403 523 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 ZZEF1O43149 2961 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 IL18RAPO95256 599 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 ITGB3P05106 788 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 CEACAM1P13688 526 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 BDNFP23560 247 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 GJB2P29033 226 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 OPRD1P41143 372 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 CASRP41180 1078 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 PTGER3P43115 390 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 MYL7Q01449 175 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 EFEMP1Q12805 493 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 ZNF268Q14587 947 aaPredicted RBP5.46□□□□□ -1.54
PTCD3-219ENST00000494323 ACAP1Q15027 740 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 POSTNQ15063 836 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 ZNF77Q15935 545 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 LONRF1Q17RB8 773 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 SOWAHAQ2M3V2 549 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 RNF220Q5VTB9 566 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 PMS2CLQ68D20 193 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 LMBRD2Q68DH5 695 aaPredicted RBP5.46□□□□□ -1.54
PTCD3-219ENST00000494323 DARS2Q6PI48 645 aaKnown RBP5.46□□□□□ -1.54
PTCD3-219ENST00000494323 DBX2Q6ZNG2 339 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 SFR1Q86XK3 245 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 SPATA2LQ8IUW3 424 aaPredicted RBP5.46□□□□□ -1.54
PTCD3-219ENST00000494323 ALLCQ8N6M5 410 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 FSIP1Q8NA03 581 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 MDGA1Q8NFP4 955 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 CACTINQ8WUQ7 758 aaKnown RBP5.46□□□□□ -1.54
PTCD3-219ENST00000494323 LRTOMTQ8WZ04 291 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 ATP2A3Q93084 1043 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 EXOC4Q96A65 974 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 ERLEC1Q96DZ1 483 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 EPSTI1Q96J88 318 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 FNBP1Q96RU3 617 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 PKMYT1Q99640 499 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 CCSER1Q9C0I3 900 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 ENKD1Q9H0I2 346 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 MRPL44Q9H9J2 332 aaKnown RBP5.46□□□□□ -1.54
PTCD3-219ENST00000494323 KIF9Q9HAQ2 790 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 PDE11AQ9HCR9 933 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 TMEM9BQ9NQ34 198 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 FSCN3Q9NQT6 498 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 SMPD4Q9NXE4 827 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 GCNT4Q9P109 453 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 UXTQ9UBK9 157 aaPredicted RBP5.46□□□□□ -1.54
PTCD3-219ENST00000494323 DAAM1Q9Y4D1 1078 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 SNX9Q9Y5X1 595 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 PTPRDP23468 1912 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 PKD1L2Q7Z442 2459 aa5.46□□□□□ -1.54
PTCD3-219ENST00000494323 DSPP15924 2871 aaKnown RBP5.45□□□□□ -1.54
PTCD3-219ENST00000494323 CEP192Q8TEP8 1941 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 SPAARA0A1B0GVQ0 90 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 UBE2QL1A1L167 161 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 MYMKA6NI61 221 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 SRRM3A6NNA2 597 aaPredicted RBP5.45□□□□□ -1.54
PTCD3-219ENST00000494323 SGK1O00141 431 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 LEFTY2O00292 366 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 NOL4O94818 638 aa5.45□□□□□ -1.54
PTCD3-219ENST00000494323 KLF8O95600 359 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms