RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 SEC31AO94979 1220 aaKnown RBP15.01□□□□□ -0.01
ACTB-213ENST00000493945 TUBBP07437 444 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 MMP2P08253 660 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 MLNP12872 115 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 ZNF30P17039 623 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 MAGEA6P43360 314 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 CUL1Q13616 776 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 GAS6Q14393 721 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 SLC1A5Q15758 541 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 UGP2Q16851 508 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 KDELC1Q6UW63 502 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 SLC36A4Q6YBV0 504 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 PARS2Q7L3T8 475 aaKnown RBP15.01□□□□□ -0.01
ACTB-213ENST00000493945 PDIK1LQ8N165 341 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 TAB3Q8N5C8 712 aaPredicted RBP15.01□□□□□ -0.01
ACTB-213ENST00000493945 GLIS1Q8NBF1 620 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 MCUQ8NE86 351 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 MDGA1Q8NFP4 955 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 MRGPRX2Q96LB1 330 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 C1QTNF7Q9BXJ2 289 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 FOXP3Q9BZS1 431 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 PREBQ9HCU5 417 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 RAD18Q9NS91 495 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 SAMD15Q9P1V8 674 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 ANAPC5Q9UJX4 755 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 ZDBF2Q9HCK1 2354 aa15□□□□□ -0.01
ACTB-213ENST00000493945 A0A0J9YYE9 177 aa15□□□□□ -0.01
ACTB-213ENST00000493945 LOC285095A0A1B0GVY8 99 aa15□□□□□ -0.01
ACTB-213ENST00000493945 CAPN8A6NHC0 703 aa15□□□□□ -0.01
ACTB-213ENST00000493945 ANKRD66B4E2M5 251 aa15□□□□□ -0.01
ACTB-213ENST00000493945 PI15O43692 258 aa15□□□□□ -0.01
ACTB-213ENST00000493945 NDUFS2O75306 463 aa15□□□□□ -0.01
ACTB-213ENST00000493945 CRTAMO95727 393 aa15□□□□□ -0.01
ACTB-213ENST00000493945 TRBC1P01850 177 aa15□□□□□ -0.01
ACTB-213ENST00000493945 AVPR2P30518 371 aa15□□□□□ -0.01
ACTB-213ENST00000493945 GKP32189 559 aa15□□□□□ -0.01
ACTB-213ENST00000493945 NUDT1P36639 197 aa15□□□□□ -0.01
ACTB-213ENST00000493945 P2RY2P41231 377 aa15□□□□□ -0.01
ACTB-213ENST00000493945 ARL4CP56559 192 aa15□□□□□ -0.01
ACTB-213ENST00000493945 FAM193AP78312 1265 aa15□□□□□ -0.01
ACTB-213ENST00000493945 GUCY2DQ02846 1103 aa15□□□□□ -0.01
ACTB-213ENST00000493945 KCNJ11Q14654 390 aa15□□□□□ -0.01
ACTB-213ENST00000493945 POM121L1PQ3SYA9 428 aa15□□□□□ -0.01
ACTB-213ENST00000493945 KCTD11Q693B1 232 aa15□□□□□ -0.01
ACTB-213ENST00000493945 KIAA1161Q6NSJ0 714 aa15□□□□□ -0.01
ACTB-213ENST00000493945 NEK5Q6P3R8 708 aa15□□□□□ -0.01
ACTB-213ENST00000493945 NLRP9Q7RTR0 991 aa15□□□□□ -0.01
ACTB-213ENST00000493945 RAVER1Q8IY67 606 aaKnown RBP15□□□□□ -0.01
ACTB-213ENST00000493945 NOA1Q8NC60 698 aaKnown RBP15□□□□□ -0.01
ACTB-213ENST00000493945 CXorf40AQ8TE69 158 aa15□□□□□ -0.01
ACTB-213ENST00000493945 LRRC1Q9BTT6 524 aa15□□□□□ -0.01
ACTB-213ENST00000493945 IL22Q9GZX6 179 aa15□□□□□ -0.01
ACTB-213ENST00000493945 PCED1AQ9H1Q7 454 aa15□□□□□ -0.01
ACTB-213ENST00000493945 DPH5Q9H2P9 285 aa15□□□□□ -0.01
ACTB-213ENST00000493945 EPHX3Q9H6B9 360 aa15□□□□□ -0.01
ACTB-213ENST00000493945 CD248Q9HCU0 757 aa15□□□□□ -0.01
ACTB-213ENST00000493945 USP36Q9P275 1121 aaKnown RBP15□□□□□ -0.01
ACTB-213ENST00000493945 TTC24A2A3L6 582 aaPredicted RBP14.99□□□□□ -0.01
ACTB-213ENST00000493945 C2orf81A6NN90 581 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 H0Y858 1186 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 PSMD11O00231 422 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 FZD6O60353 706 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 IGLV3-19P01714 112 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 ELFN1P0C7U0 828 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 CD6P30203 668 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 VIPR1P32241 457 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 CNR2P34972 360 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 NPY2RP49146 381 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 TPMTP51580 245 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 ITGA8P53708 1063 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 CNTN1Q12860 1018 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 GALNT3Q14435 633 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 HLTFQ14527 1009 aaKnown RBP eCLIP14.99□□□□□ -0.01
ACTB-213ENST00000493945 ZNF528Q3MIS6 628 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 RNASEH2BQ5TBB1 312 aaKnown RBP14.99□□□□□ -0.01
ACTB-213ENST00000493945 ZDHHC20Q5W0Z9 365 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 DUPD1Q68J44 220 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 LRRC8BQ6P9F7 803 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.99□□□□□ -0.01
ACTB-213ENST00000493945 KDELC2Q7Z4H8 507 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 LONP2Q86WA8 852 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 SLC25A41Q8N5S1 370 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 GPR161Q8N6U8 529 aaKnown RBP14.99□□□□□ -0.01
ACTB-213ENST00000493945 TMEM105Q8N8V8 129 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 PPHLN1Q8NEY8 458 aaKnown RBP14.99□□□□□ -0.01
ACTB-213ENST00000493945 OR14C36Q8NHC7 312 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 GABPB2Q8TAK5 448 aaPredicted RBP14.99□□□□□ -0.01
ACTB-213ENST00000493945 PTCD2Q8WV60 388 aaKnown RBP14.99□□□□□ -0.01
ACTB-213ENST00000493945 CPT1BQ92523 772 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 ARRDC3Q96B67 414 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 ERLEC1Q96DZ1 483 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 SCRN2Q96FV2 425 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 PHACTR1Q9C0D0 580 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 CDH19Q9H159 772 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 ARNT2Q9HBZ2 717 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 MAGEE1Q9HCI5 957 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 ITM2CQ9NQX7 267 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 SARDHQ9UL12 918 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 SNX24Q9Y343 169 aa14.99□□□□□ -0.01
ACTB-213ENST00000493945 PLXND1Q9Y4D7 1925 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms