RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, human

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF3A-208	ENST00000493903	ERCC2	P18074	760 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	ZFP36	P26651	326 aa	Known RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	YWHAQ	P27348	245 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	CENPA	P49450	140 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	CYP2J2	P51589	502 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	CCR3	P51677	355 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	POLG	P54098	1239 aa	Predicted RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	CSE1L	P55060	971 aa	Known RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	CYP4F2	P78329	520 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	SCN1B	Q07699	218 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	RUNX2	Q13950	521 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	KCNB1	Q14721	858 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	MORF4L2	Q15014	288 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	LARS2	Q15031	903 aa	Known RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	ME3	Q16798	604 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	HYAL4	Q2M3T9	481 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	KRTCAP3	Q53RY4	240 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	ERICH6B	Q5W0A0	696 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	RANBP10	Q6VN20	620 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	DCDC5	Q6ZRR9	648 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	SEPT14	Q6ZU15	432 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	LIMS2	Q7Z4I7	341 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	MMP21	Q8N119	569 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	ZNF276	Q8N554	614 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	NAT8L	Q8N9F0	302 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	TSPAN14	Q8NG11	270 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	MGARP	Q8TDB4	240 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	FAR1	Q8WVX9	515 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	ZFPM2	Q8WW38	1151 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	SNX21	Q969T3	373 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	PABPC5	Q96DU9	382 aa	Known RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	BBS4	Q96RK4	519 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	AIFM2	Q9BRQ8	373 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	GATA5	Q9BWX5	397 aa	Predicted RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	CIPC	Q9C0C6	399 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	ST6GALNAC4	Q9H4F1	302 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	ADPRHL2	Q9NX46	363 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	SH3BP4	Q9P0V3	963 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	LRIT1	Q9P2V4	623 aa		4.58	□□□□□ -1.68
GTF3A-208	ENST00000493903	NCAN	O14594	1321 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	GPR75-ASB3	A0A0A6YYF3	556 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903		A0A1B0GVM2	712 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	PIPSL	A2A3N6	862 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	TARSL2	A2RTX5	802 aa	Known RBP	4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	UNC119B	A6NIH7	251 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	C19orf81	C9J6K1	198 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	FAM157A	C9JC47	383 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	CHL1	O00533	1208 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	PRRG2	O14669	202 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	EXOC3	O60645	756 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	FAM20B	O75063	409 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	NKX2-2	O95096	273 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	ITGB3	P05106	788 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	ELFN1	P0C7U0	828 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	THEGL	P0DJG4	465 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	ITGAM	P11215	1152 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	NR4A1	P22736	598 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	RYK	P34925	604 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	CXCL9	Q07325	125 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	IL11RA	Q14626	422 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	PKN2	Q16513	984 aa	Known RBP	4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	COL28A1	Q2UY09	1125 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	USP41	Q3LFD5	358 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	TIGD2	Q4W5G0	525 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	ARL13A	Q5H913	290 aa	Predicted RBP	4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	PCID2	Q5JVF3	399 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	C6orf141	Q5SZD1	244 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	TBC1D9B	Q66K14	1250 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	CAVIN1	Q6NZI2	390 aa	Known RBP	4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	TATDN1	Q6P1N9	297 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	SHQ1	Q6PI26	577 aa	Known RBP	4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	DHRS13	Q6UX07	377 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	TBC1D26	Q86UD7	250 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	WDR5B	Q86VZ2	330 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	UEVLD	Q8IX04	471 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	DHX40	Q8IX18	779 aa	Known RBP	4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	GUF1	Q8N442	669 aa	Known RBP	4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	TC2N	Q8N9U0	490 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	TERB1	Q8NA31	727 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	MOSPD2	Q8NHP6	518 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	GRK7	Q8WTQ7	553 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	TFAP2B	Q92481	460 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	MRPS27	Q92552	414 aa	Known RBP	4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	PTP4A1	Q93096	173 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	HDAC11	Q96DB2	347 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	PI4K2A	Q9BTU6	479 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	IFIH1	Q9BYX4	1025 aa	Known RBP	4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	NUAK2	Q9H093	628 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	CXorf56	Q9H5V9	222 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	MAFF	Q9ULX9	164 aa		4.57	□□□□□ -1.68
GTF3A-208	ENST00000493903	PLAGL1	Q9UM63	463 aa		4.57	□□□□□ -1.68

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