RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 TIMP1P01033 207 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 RBP1P09455 135 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 MBL2P11226 248 aaPredicted RBP10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 WDR5P61964 334 aaKnown RBP10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 PRKAA1Q13131 559 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 RALGPS1Q5JS13 557 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 CFAP157Q5JU67 520 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 KLC3Q6P597 504 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 NAPRTQ6XQN6 538 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 HJURPQ8NCD3 748 aaPredicted RBP10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 FAM13CQ8NE31 585 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 OR52K2Q8NGK3 314 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 OR6P1Q8NGX9 317 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 CFAP61Q8NHU2 1237 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 NXNL1Q96CM4 212 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 NUDCD1Q96RS6 583 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 MIPEPQ99797 713 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 C1orf21Q9H246 121 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 POPDC3Q9HBV1 291 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 GKN1Q9NS71 199 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 VTI1BQ9UEU0 232 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 PLXNA4Q9HCM2 1894 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 ANAPC1Q9H1A4 1944 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 SPECC1L-ADORA2AF8WAN1 911 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 GLP2RO95838 553 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 S1PR4O95977 384 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 F11P03951 625 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 LTA4HP09960 611 aaKnown RBP10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 ATP5F1P24539 256 aaPredicted RBP10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 GRIA4P48058 902 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 HTRA3P83110 453 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 DNAL1Q4LDG9 190 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 HECTD2Q5U5R9 776 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 CXorf57Q6NSI4 855 aaKnown RBP10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 EPGNQ6UW88 154 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 PIWIL4Q7Z3Z4 852 aaKnown RBP10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 MAVSQ7Z434 540 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 PTAR1Q7Z6K3 402 aaPredicted RBP10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 TMPRSS6Q8IU80 811 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 TEX9Q8N6V9 391 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 ZFRQ96KR1 1074 aaKnown RBP10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 TDRD1Q9BXT4 1180 aaKnown RBP10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 CADM1Q9BY67 442 aaKnown RBP10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 IGSF5Q9NSI5 407 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 ARMCX1Q9P291 453 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 VWA7Q9Y334 891 aa10.85□□□□□ -0.67
PHACTR4-204ENST00000493669 TTC24A2A3L6 582 aaPredicted RBP10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 GFRA2O00451 464 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 GSC2O15499 205 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 WISP3O95389 354 aaPredicted RBP10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 ARSDP51689 593 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 ALDH18A1P54886 795 aaKnown RBP10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 DEFB103AP81534 67 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 DLG1Q12959 904 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 ACAP2Q15057 778 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 INO80DQ53TQ3 878 aaPredicted RBP10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 FSCBQ5H9T9 825 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 ATG14Q6ZNE5 492 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 TMEM150AQ86TG1 271 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 TREML1Q86YW5 311 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 FAM217AQ8IXS0 508 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 KIRREL3Q8IZU9 778 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 ZNF781Q8N8C0 355 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 TDRD5Q8NAT2 981 aaKnown RBP10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 BLOC1S5Q8TDH9 187 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 ZNF333Q96JL9 665 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 SCUBE2Q9NQ36 999 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 TAS2R1Q9NYW7 299 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 DLX3O60479 287 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 LILRB3O75022 631 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 IRF1P10914 325 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 SGSHP51688 502 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 SMAD3P84022 425 aaKnown RBP10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 CYTH1Q15438 398 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 TAF1AQ15573 450 aaPredicted RBP10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 TYSND1Q2T9J0 566 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 TECRLQ5HYJ1 363 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 RBM20Q5T481 1227 aaKnown RBP10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 RNF219Q5W0B1 726 aaPredicted RBP10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 SDCCAG8Q86SQ7 713 aaPredicted RBP10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 DIS3LQ8TF46 1054 aaKnown RBP10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 HEXDCQ8WVB3 486 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 MCUR1Q96AQ8 359 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 UBXN10Q96LJ8 280 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 MUC3BQ9H195 1237 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 INTS10Q9NVR2 710 aaKnown RBP10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 NLE1Q9NVX2 485 aaPredicted RBP10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 NCKIPSDQ9NZQ3 722 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 ZNF510Q9Y2H8 683 aa10.84□□□□□ -0.67
PHACTR4-204ENST00000493669 AURKAO14965 403 aa10.83□□□□□ -0.68
PHACTR4-204ENST00000493669 KIAA0355O15063 1070 aa10.83□□□□□ -0.68
PHACTR4-204ENST00000493669 HDAC3O15379 428 aa10.83□□□□□ -0.68
PHACTR4-204ENST00000493669 CD3EAPO15446 510 aaKnown RBP10.83□□□□□ -0.68
PHACTR4-204ENST00000493669 MAGEC1O60732 1142 aa10.83□□□□□ -0.68
PHACTR4-204ENST00000493669 GOT2P00505 430 aaKnown RBP10.83□□□□□ -0.68
PHACTR4-204ENST00000493669 PENKP01210 267 aaPredicted RBP10.83□□□□□ -0.68
PHACTR4-204ENST00000493669 LMNAP02545 664 aaKnown RBP10.83□□□□□ -0.68
PHACTR4-204ENST00000493669 PFKLP17858 780 aa10.83□□□□□ -0.68
PHACTR4-204ENST00000493669 PRDX6P30041 224 aa10.83□□□□□ -0.68
PHACTR4-204ENST00000493669 GLRBP48167 497 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms