RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 C2CD4BA6NLJ0 364 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 GFPT2O94808 682 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 PCCBP05166 539 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 ITIH1P19827 911 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 MMP8P22894 467 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 CCKBRP32239 447 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 PTPN9P43378 593 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 HDAC4P56524 1084 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 INO80DQ53TQ3 878 aaPredicted RBP12.44□□□□□ -0.42
SAMM50-205ENST00000493621 CCNJLQ8IV13 435 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 PYROXD2Q8N2H3 581 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 RTL3Q8N8U3 475 aaKnown RBP12.44□□□□□ -0.42
SAMM50-205ENST00000493621 Q8N9G6 341 aaPredicted RBP12.44□□□□□ -0.42
SAMM50-205ENST00000493621 OR6C4Q8NGE1 309 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 ATL2Q8NHH9 583 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 SLC30A5Q8TAD4 765 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 CENPIQ92674 756 aaPredicted RBP12.44□□□□□ -0.42
SAMM50-205ENST00000493621 EXTL1Q92935 676 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 HMCESQ96FZ2 354 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 PCDH12Q9NPG4 1184 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 LHX3Q9UBR4 397 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 NOCTQ9UK39 431 aaKnown RBP12.44□□□□□ -0.42
SAMM50-205ENST00000493621 ACSL6Q9UKU0 697 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 DAAM1Q9Y4D1 1078 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 LOXL2Q9Y4K0 774 aa12.44□□□□□ -0.42
SAMM50-205ENST00000493621 ARHGEF17Q96PE2 2063 aaPredicted RBP12.44□□□□□ -0.42
SAMM50-205ENST00000493621 UBR5O95071 2799 aaPredicted RBP12.43□□□□□ -0.42
SAMM50-205ENST00000493621 RASA4BC9J798 803 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 NVLO15381 856 aaKnown RBP12.43□□□□□ -0.42
SAMM50-205ENST00000493621 RASA4O43374 803 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 TNFP01375 233 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 CYP1A1P04798 512 aaPredicted RBP12.43□□□□□ -0.42
SAMM50-205ENST00000493621 LIPCP11150 499 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 CHRNB2P17787 502 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 EPHB2P29323 1055 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 LIG3P49916 1009 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 CSRP3P50461 194 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 SUOXP51687 545 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 NFKB2Q00653 900 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 FMO1Q01740 532 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 CDR2Q01850 454 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 SERINC3Q13530 473 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 CYTH1Q15438 398 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 UGP2Q16851 508 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 KCTD16Q68DU8 428 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 SLFN11Q7Z7L1 901 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 ZNF677Q86XU0 584 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 GPR156Q8NFN8 814 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 NTAN1Q96AB6 310 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 PDXPQ96GD0 296 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 WDR92Q96MX6 357 aa12.43□□□□□ -0.42
SAMM50-205ENST00000493621 RBM15Q96T37 977 aaKnown RBP eCLIP12.43□□□□□ -0.42
SAMM50-205ENST00000493621 SPTA1P02549 2419 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 PRAMEF33A0A0G2JMD5 474 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 TSPAN11A1L157 253 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 CREB3O43889 395 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 PRAMEF10O60809 474 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 ITGB2P05107 769 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 PRKCGP05129 697 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 FAM87AP0C7U9 286 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 KRT3P12035 628 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 GPD1P21695 349 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 RFC1P35251 1148 aaPredicted RBP12.42□□□□□ -0.42
SAMM50-205ENST00000493621 ETV5P41161 510 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 MAPK10P53779 464 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 YBEYP58557 167 aaPredicted RBP12.42□□□□□ -0.42
SAMM50-205ENST00000493621 MTM1Q13496 603 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 EFHC2Q5JST6 749 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 MANEAQ5SRI9 462 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 CFAP58Q5T655 872 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 ERAP2Q6P179 960 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 SCYL2Q6P3W7 929 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 XKR5Q6UX68 686 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 TAF8Q7Z7C8 310 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 VASH2Q86V25 355 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 ZFAND4Q86XD8 727 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 DNAAF5Q86Y56 855 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 SFTPA2Q8IWL1 248 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 PLA2G15Q8NCC3 412 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 FAM46DQ8NEK8 389 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 HCAR2Q8TDS4 363 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 OR1E3Q8WZA6 343 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 SELENOOQ9BVL4 669 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 SUV39H2Q9H5I1 410 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 SEPT10Q9P0V9 454 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 UBA2Q9UBT2 640 aaPredicted RBP12.42□□□□□ -0.42
SAMM50-205ENST00000493621 IL17BQ9UHF5 180 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 APPL1Q9UKG1 709 aa12.42□□□□□ -0.42
SAMM50-205ENST00000493621 TLN1Q9Y490 2541 aaKnown RBP12.42□□□□□ -0.42
SAMM50-205ENST00000493621 TMEM202A6NGA9 273 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 B4DGG1 531 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 BUB1BO60566 1050 aaPredicted RBP12.41□□□□□ -0.42
SAMM50-205ENST00000493621 GLB1P16278 677 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 MMP12P39900 470 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 UBE2HP62256 183 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 ZFP36L1Q07352 338 aaKnown RBP12.41□□□□□ -0.42
SAMM50-205ENST00000493621 PTP4A2Q12974 167 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 GRM3Q14832 879 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 AGERQ15109 404 aa12.41□□□□□ -0.42
SAMM50-205ENST00000493621 DPCR1Q3MIW9 517 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms