RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 CYP11B1P15538 503 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 ITIH2P19823 946 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 ADRA1BP35368 520 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 ETV5P41161 510 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 MAPK10P53779 464 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 ATP11AP98196 1134 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 MTM1Q13496 603 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 INPP5AQ14642 412 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 OGFOD3Q6PK18 319 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 LEKR1Q6ZMV7 388 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 SLITRK4Q8IW52 837 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 ANKMY1Q9P2S6 941 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 RWDD2AQ9UIY3 292 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 NEU3Q9UQ49 428 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 COQ6Q9Y2Z9 468 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 OR1A2Q9Y585 309 aa17.82■□□□□ 0.44
NUP50-218ENST00000493456 SPENQ96T58 3664 aaKnown RBP17.82■□□□□ 0.44
NUP50-218ENST00000493456 STMND1H3BQB6 276 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 NUDT21O43809 227 aaKnown RBP17.81■□□□□ 0.44
NUP50-218ENST00000493456 LRIG2O94898 1065 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 WT1P19544 449 aaPredicted RBP17.81■□□□□ 0.44
NUP50-218ENST00000493456 RHOAP61586 193 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 CYP4F2P78329 520 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 ARHGEF7Q14155 803 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 GRM3Q14832 879 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 CLCA4Q14CN2 919 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 C14orf28Q4W4Y0 310 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 TAF8Q7Z7C8 310 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 ZNF354CQ86Y25 554 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 HMCESQ96FZ2 354 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 PDXPQ96GD0 296 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 NCAPGQ9BPX3 1015 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 LRIT1Q9P2V4 623 aa17.81■□□□□ 0.44
NUP50-218ENST00000493456 TSPAN11A1L157 253 aa17.8■□□□□ 0.44
NUP50-218ENST00000493456 SDC4P31431 198 aa17.8■□□□□ 0.44
NUP50-218ENST00000493456 KIAA1024LP59773 190 aa17.8■□□□□ 0.44
NUP50-218ENST00000493456 HLTFQ14527 1009 aaKnown RBP eCLIP17.8■□□□□ 0.44
NUP50-218ENST00000493456 UGP2Q16851 508 aa17.8■□□□□ 0.44
NUP50-218ENST00000493456 MAP9Q49MG5 647 aa17.8■□□□□ 0.44
NUP50-218ENST00000493456 C2CD6Q53TS8 623 aa17.8■□□□□ 0.44
NUP50-218ENST00000493456 PHF19Q5T6S3 580 aa17.8■□□□□ 0.44
NUP50-218ENST00000493456 ERAP2Q6P179 960 aa17.8■□□□□ 0.44
NUP50-218ENST00000493456 BORAQ6PGQ7 559 aa17.8■□□□□ 0.44
NUP50-218ENST00000493456 FAM46DQ8NEK8 389 aa17.8■□□□□ 0.44
NUP50-218ENST00000493456 ZNF564Q8TBZ8 553 aaPredicted RBP17.8■□□□□ 0.44
NUP50-218ENST00000493456 PCDH12Q9NPG4 1184 aa17.8■□□□□ 0.44
NUP50-218ENST00000493456 METTL5Q9NRN9 209 aaKnown RBP17.8■□□□□ 0.44
NUP50-218ENST00000493456 TUBD1Q9UJT1 453 aa17.8■□□□□ 0.44
NUP50-218ENST00000493456 DOPEY2Q9Y3R5 2298 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 FAM72CH0Y354 149 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 CACNB4O00305 520 aaPredicted RBP17.79■□□□□ 0.44
NUP50-218ENST00000493456 PCCBP05166 539 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 PLEKP08567 350 aaPredicted RBP17.79■□□□□ 0.44
NUP50-218ENST00000493456 KELP23276 732 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 MTIF2P46199 727 aaKnown RBP17.79■□□□□ 0.44
NUP50-218ENST00000493456 LIG3P49916 1009 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 ATP1A2P50993 1020 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 RAPGEF1Q13905 1077 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 CLPPQ16740 277 aaPredicted RBP17.79■□□□□ 0.44
NUP50-218ENST00000493456 CDO1Q16878 200 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 FAM72AQ5TYM5 149 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 TAF3Q5VWG9 929 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 FAM72DQ6L9T8 149 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 STRADAQ7RTN6 431 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 FAM72BQ86X60 149 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 DNAAF5Q86Y56 855 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 IRF2BP1Q8IU81 584 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 LURAP1LQ8IV03 231 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 EMC1Q8N766 993 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 OR56A4Q8NGH8 313 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 KIAA1524Q8TCG1 905 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 DAAM1Q9Y4D1 1078 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 UNC13CQ8NB66 2214 aa17.79■□□□□ 0.44
NUP50-218ENST00000493456 NBPF19A0A087WUL8 3843 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 CFAP69A5D8W1 941 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 B4DGG1 531 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 TNFRSF10CO14798 259 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 HGSO14964 777 aaPredicted RBP17.78■□□□□ 0.44
NUP50-218ENST00000493456 ZW10O43264 779 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 PIGNO95427 931 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 CPNE6O95741 557 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 MMP12P39900 470 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 NOMO3P69849 1222 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 UBAP2LQ14157 1087 aaKnown RBP17.78■□□□□ 0.44
NUP50-218ENST00000493456 C16orf72Q14CZ0 275 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 C15orf59Q2T9L4 293 aaPredicted RBP17.78■□□□□ 0.44
NUP50-218ENST00000493456 CFAP58Q5T655 872 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 SPECC1LQ69YQ0 1117 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 BRAT1Q6PJG6 821 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 NYAP1Q6ZVC0 841 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 TMPRSS9Q7Z410 1059 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 PIM3Q86V86 326 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 RTL3Q8N8U3 475 aaKnown RBP17.78■□□□□ 0.44
NUP50-218ENST00000493456 GPBAR1Q8TDU6 330 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 CPA5Q8WXQ8 436 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 OR1E3Q8WZA6 343 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 SLC12A9Q9BXP2 914 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 SEMA6CQ9H3T2 930 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 SUV39H2Q9H5I1 410 aa17.78■□□□□ 0.44
NUP50-218ENST00000493456 LRRK1Q38SD2 2015 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms