RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ANXA6P08133 673 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TBC1D3HP0C7X1 549 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 PEPDP12955 493 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 EEF1GP26641 437 aaKnown RBP3.44□□□□□ -1.86
PTCD3-218ENST00000493430 PDLIM4P50479 330 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 PMS2P54278 862 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 SEC61A1P61619 476 aaKnown RBP3.44□□□□□ -1.86
PTCD3-218ENST00000493430 NEXNQ0ZGT2 675 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 DUSP6Q16828 381 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 SLC35G1Q2M3R5 365 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 ARL13AQ5H913 290 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-218ENST00000493430 FAM209BQ5JX69 171 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 ZNF569Q5MCW4 686 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TBC1D3GQ6DHY5 549 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TBC1D3CQ6IPX1 549 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 USP50Q70EL3 339 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-218ENST00000493430 CREB3L2Q70SY1 520 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 ZNF367Q7RTV3 350 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 C16orf82Q7Z2V1 217 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 ATG9AQ7Z3C6 839 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 ARMC9Q7Z3E5 817 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 DPP9Q86TI2 863 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 CCDC25Q86WR0 208 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 WDR63Q8IWG1 891 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TBC1D3Q8IZP1 549 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TMEM57Q8N5G2 664 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 DPP10Q8N608 796 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 BICD2Q8TD16 824 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 FRAT1Q92837 279 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-218ENST00000493430 ZNF566Q969W8 418 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 RTP4Q96DX8 246 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 PRMT6Q96LA8 375 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-218ENST00000493430 MPHOSPH8Q99549 860 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TMEM39BQ9GZU3 492 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 USP44Q9H0E7 712 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 CCDC134Q9H6E4 229 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TDRD3Q9H7E2 651 aaKnown RBP3.44□□□□□ -1.86
PTCD3-218ENST00000493430 CD209Q9NNX6 404 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 C9orf78Q9NZ63 289 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-218ENST00000493430 RAB21Q9UL25 225 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 NFU1Q9UMS0 254 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 FAM50BQ9Y247 325 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 CEP83Q9Y592 693 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 SIP14410 1827 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 KIAA1671Q9BY89 1806 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 TRBV5-7A0A0A0MS05 114 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 STMND1H3BQB6 276 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 PCDH17O14917 1159 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 ZBTB11O95625 1053 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-218ENST00000493430 TRIM27P14373 513 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 HMGB2P26583 209 aaKnown RBP3.43□□□□□ -1.86
PTCD3-218ENST00000493430 KLRC2P26717 231 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 CLCN5P51795 746 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 RBM5P52756 815 aaKnown RBP eCLIP3.43□□□□□ -1.86
PTCD3-218ENST00000493430 POU3F1Q03052 451 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-218ENST00000493430 CALD1Q05682 793 aaKnown RBP3.43□□□□□ -1.86
PTCD3-218ENST00000493430 TCP10Q12799 353 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 COASYQ13057 564 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 COBLL1Q53SF7 1204 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 C20orf194Q5TEA3 1177 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 C9orf57Q5W0N0 161 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 C8orf82Q6P1X6 216 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-218ENST00000493430 LDHAL6AQ6ZMR3 332 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 Q6ZSV7 163 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 TMPRSS12Q86WS5 348 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 ANKRD13AQ8IZ07 590 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 CLIP4Q8N3C7 705 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 CMASQ8NFW8 434 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-218ENST00000493430 ABHD8Q96I13 439 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 ZBED3Q96IU2 234 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-218ENST00000493430 EYA3Q99504 573 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 MYH16Q9H6N6 1097 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 TM7SF3Q9NS93 570 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 KCNG2Q9UJ96 466 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 MAGED2Q9UNF1 606 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-218ENST00000493430 RIPOR2Q9Y4F9 1068 aa3.43□□□□□ -1.86
PTCD3-218ENST00000493430 COPG1Q9Y678 874 aaKnown RBP3.43□□□□□ -1.86
PTCD3-218ENST00000493430 RFX7Q2KHR2 1363 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 NLRC5Q86WI3 1866 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 ASAP2O43150 1006 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 RPP40O75818 363 aaKnown RBP3.42□□□□□ -1.86
PTCD3-218ENST00000493430 KRT10P13645 584 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 TNFSF4P23510 183 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 RARSP54136 660 aaKnown RBP3.42□□□□□ -1.86
PTCD3-218ENST00000493430 ALDH18A1P54886 795 aaKnown RBP3.42□□□□□ -1.86
PTCD3-218ENST00000493430 EEF1A2Q05639 463 aaKnown RBP3.42□□□□□ -1.86
PTCD3-218ENST00000493430 TFCP2Q12800 502 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 TNIP1Q15025 636 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 PLCB4Q15147 1175 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 RAB30Q15771 203 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 RABL6Q3YEC7 729 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-218ENST00000493430 OTUD3Q5T2D3 398 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-218ENST00000493430 RINT1Q6NUQ1 792 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 RGMBQ6NW40 437 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 H1FNTQ75WM6 255 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-218ENST00000493430 ANKS1BQ7Z6G8 1248 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 ADGRA1Q86SQ6 560 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 NRSN1Q8IZ57 195 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 OR14A16Q8NHC5 309 aa3.42□□□□□ -1.86
PTCD3-218ENST00000493430 DCPSQ96C86 337 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms