RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 MRM3Q9HC36 420 aaKnown RBP12.95□□□□□ -0.34
PRAME-213ENST00000492657 PREBQ9HCU5 417 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 RHBDL2Q9NX52 303 aa12.95□□□□□ -0.34
PRAME-213ENST00000492657 MARCH4Q9P2E8 410 aaPredicted RBP12.95□□□□□ -0.34
PRAME-213ENST00000492657 PIRTP0C851 137 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 PAMP19021 973 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 PIK3R1P27986 724 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 KCNQ1P51787 676 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 SLC12A2P55011 1212 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 SIRPB2Q5JXA9 342 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 MAP3K21Q5TCX8 1036 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 PGM2L1Q6PCE3 622 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 RNF111Q6ZNA4 994 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 TMEM173Q86WV6 379 aaPredicted RBP12.94□□□□□ -0.34
PRAME-213ENST00000492657 RDH11Q8TC12 318 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 ANKRD49Q8WVL7 239 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 MRPL46Q9H2W6 279 aaKnown RBP12.94□□□□□ -0.34
PRAME-213ENST00000492657 EBF3Q9H4W6 596 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 ATP13A1Q9HD20 1204 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 TNFRSF12AQ9NP84 129 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 CDH22Q9UJ99 828 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 MID2Q9UJV3 735 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 SH3BP1Q9Y3L3 701 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 GREB1Q4ZG55 1949 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 HEATR9A2RTY3 570 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 MAGEA13PA6NCF6 341 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 TMEM189-UBE2V1I3L0A0 370 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 H2AFYO75367 372 aaKnown RBP12.94□□□□□ -0.34
PRAME-213ENST00000492657 SLC2A3P11169 496 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 COL6A2P12110 1019 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 CRABP2P29373 138 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 DSG1Q02413 1049 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 DUSP4Q13115 394 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 CCNIQ14094 377 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 POLD3Q15054 466 aaPredicted RBP12.94□□□□□ -0.34
PRAME-213ENST00000492657 LRRC23Q53EV4 343 aaPredicted RBP12.94□□□□□ -0.34
PRAME-213ENST00000492657 FSCBQ5H9T9 825 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 NADSYN1Q6IA69 706 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 TRIM67Q6ZTA4 783 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 SNX32Q86XE0 403 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 ATP6V0D2Q8N8Y2 350 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 KDM1BQ8NB78 822 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 SLC26A7Q8TE54 656 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 PTCD2Q8WV60 388 aaKnown RBP12.94□□□□□ -0.34
PRAME-213ENST00000492657 POMKQ9H5K3 350 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 ARNT2Q9HBZ2 717 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 SQORQ9Y6N5 450 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 PLXNA3P51805 1871 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 SP3Q02447 781 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 TBL3Q12788 808 aaKnown RBP12.94□□□□□ -0.34
PRAME-213ENST00000492657 PRKAA1Q13131 559 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 TRIP4Q15650 581 aaPredicted RBP12.94□□□□□ -0.34
PRAME-213ENST00000492657 RTP2Q5QGT7 225 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 LRRC49Q8IUZ0 686 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 CCDC117Q8IWD4 279 aaPredicted RBP12.94□□□□□ -0.34
PRAME-213ENST00000492657 DBF4BQ8NFT6 615 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 ACTRT2Q8TDY3 377 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 BTN2A3PQ96KV6 586 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 SEMA3CQ99985 751 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 ECSITQ9BQ95 431 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 CLIC5Q9NZA1 410 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 IL37Q9NZH6 218 aa12.94□□□□□ -0.34
PRAME-213ENST00000492657 MKI67P46013 3256 aaKnown RBP12.93□□□□□ -0.34
PRAME-213ENST00000492657 IGLV3-10A0A075B6K4 115 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 MTMR11A4FU01 709 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 CCNT2O60583 730 aaKnown RBP12.93□□□□□ -0.34
PRAME-213ENST00000492657 PGM3O95394 542 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 CCDC166P0CW27 439 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 OR1E1P30953 314 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 KCNC1P48547 511 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 SLC11A1P49279 550 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 CDKN2DP55273 166 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 NSUN2Q08J23 767 aaKnown RBP eCLIP12.93□□□□□ -0.34
PRAME-213ENST00000492657 MRPL58Q14197 206 aaKnown RBP12.93□□□□□ -0.34
PRAME-213ENST00000492657 GPNMBQ14956 572 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 TCTN1Q2MV58 587 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 TMEM207Q6UWW9 146 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 PIM3Q86V86 326 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 PRKD2Q9BZL6 878 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 MARCH5Q9NX47 278 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 CRYL1Q9Y2S2 319 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 THSD7BQ9C0I4 1608 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 ANKRD12Q6UB98 2062 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 ENPP3O14638 875 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 RAMP2O60895 175 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 NBNO60934 754 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 ATXN1LP0C7T5 689 aaKnown RBP12.93□□□□□ -0.34
PRAME-213ENST00000492657 MSX2P35548 267 aaPredicted RBP12.93□□□□□ -0.34
PRAME-213ENST00000492657 GRIA2P42262 883 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 MAGEA11P43364 429 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 POU4F1Q01851 419 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 SH2D4BQ5SQS7 431 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 LPCAT4Q643R3 524 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 PRSS55Q6UWB4 352 aaPredicted RBP12.93□□□□□ -0.34
PRAME-213ENST00000492657 ABI1Q8IZP0 508 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 PHF21BQ96EK2 531 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 TBATAQ96M53 351 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 MRPL57Q9BQC6 102 aaKnown RBP12.93□□□□□ -0.34
PRAME-213ENST00000492657 S100A14Q9HCY8 104 aa12.93□□□□□ -0.34
PRAME-213ENST00000492657 GTSE1Q9NYZ3 720 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms