RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ITPR2Q14571 2701 aa13.35□□□□□ -0.27
USF1-206ENST00000491629 MYO9AB2RTY4 2548 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 A0A1W2PQC6 194 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 GTPBP10A4D1E9 387 aaKnown RBP13.34□□□□□ -0.27
USF1-206ENST00000491629 CLEC18AA5D8T8 446 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 TMEM202A6NGA9 273 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 B4GAT1O43505 415 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 KDELR3O43731 214 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 PPFIA2O75334 1257 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 LRIG2O94898 1065 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 RASGRP1O95267 797 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 PIGNO95427 931 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 CCL4P13236 92 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 RHOQP17081 205 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 ADRA1BP35368 520 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 MAPKAPK2P49137 400 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 MAPK10P53779 464 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 SNX16P57768 344 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 ATP11AP98196 1134 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 B4GALNT1Q00973 533 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 HLTFQ14527 1009 aaKnown RBP eCLIP13.34□□□□□ -0.27
USF1-206ENST00000491629 POLD3Q15054 466 aaPredicted RBP13.34□□□□□ -0.27
USF1-206ENST00000491629 CLEC18BQ6UXF7 455 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 ZSWIM9Q86XI8 627 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 GKN2Q86XP6 184 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 PTRH1Q86Y79 214 aaKnown RBP13.34□□□□□ -0.27
USF1-206ENST00000491629 PELI3Q8N2H9 469 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 CLEC18CQ8NCF0 446 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 TMEM35BQ8NCS4 154 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 CCL4L1Q8NHW4 92 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 SCG3Q8WXD2 468 aaKnown RBP13.34□□□□□ -0.27
USF1-206ENST00000491629 JPH3Q8WXH2 748 aaPredicted RBP13.34□□□□□ -0.27
USF1-206ENST00000491629 EPN3Q9H201 632 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 FGF22Q9HCT0 170 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 MRPL40Q9NQ50 206 aaKnown RBP13.34□□□□□ -0.27
USF1-206ENST00000491629 LHX3Q9UBR4 397 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 KLQ9UEF7 1012 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 MFHAS1Q9Y4C4 1052 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 DGKBQ9Y6T7 804 aa13.34□□□□□ -0.27
USF1-206ENST00000491629 CENPEQ02224 2701 aa13.33□□□□□ -0.27
USF1-206ENST00000491629 TSPAN11A1L157 253 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 TMEM110-MUSTN1A8MSY1 372 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.33□□□□□ -0.28
USF1-206ENST00000491629 CYP11B1P15538 503 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 GLB1P16278 677 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 GM2AP17900 193 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 AGERQ15109 404 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 SKIDA1Q1XH10 827 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 CCDC14Q49A88 953 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 TAF3Q5VWG9 929 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 RWDD4Q6NW29 188 aaKnown RBP13.33□□□□□ -0.28
USF1-206ENST00000491629 NOP9Q86U38 636 aaKnown RBP13.33□□□□□ -0.28
USF1-206ENST00000491629 CCDC185Q8N715 623 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 OR6C4Q8NGE1 309 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 CPA5Q8WXQ8 436 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 EXOC2Q96KP1 924 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 WDR92Q96MX6 357 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 GDAP1L1Q96MZ0 367 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 C1QTNF7Q9BXJ2 289 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 TMEM168Q9H0V1 697 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 RDH14Q9HBH5 336 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 PCDH12Q9NPG4 1184 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 METTL5Q9NRN9 209 aaKnown RBP13.33□□□□□ -0.28
USF1-206ENST00000491629 SEPT10Q9P0V9 454 aa13.33□□□□□ -0.28
USF1-206ENST00000491629 HOOK1Q9UJC3 728 aaKnown RBP13.33□□□□□ -0.28
USF1-206ENST00000491629 RP1L1Q8IWN7 2480 aaPredicted RBP13.32□□□□□ -0.28
USF1-206ENST00000491629 GOLGA6L4A6NEF3 574 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 BUB1BO60566 1050 aaPredicted RBP13.32□□□□□ -0.28
USF1-206ENST00000491629 RAMP2O60895 175 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 PRKCGP05129 697 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 SFTPCP11686 197 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 PNLIPP16233 465 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 ETFBP38117 255 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 MMP12P39900 470 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 GEMIN4P57678 1058 aaKnown RBP13.32□□□□□ -0.28
USF1-206ENST00000491629 NOMO3P69849 1222 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 UBAP2LQ14157 1087 aaKnown RBP13.32□□□□□ -0.28
USF1-206ENST00000491629 CYTH1Q15438 398 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 IGFBP7Q16270 282 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 UGP2Q16851 508 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 CDO1Q16878 200 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 C14orf28Q4W4Y0 310 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 SMYD5Q6GMV2 418 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 ARCQ7LC44 396 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 PHLDB2Q86SQ0 1253 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 CREBRFQ8IUR6 639 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 PYROXD2Q8N2H3 581 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 FAM46DQ8NEK8 389 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 JOSD2Q8TAC2 188 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 GPT2Q8TD30 523 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 NKD1Q969G9 470 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 LRIT1Q9P2V4 623 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 FHOD1Q9Y613 1164 aa13.32□□□□□ -0.28
USF1-206ENST00000491629 PRRC2CQ9Y520 2896 aaKnown RBP13.32□□□□□ -0.28
USF1-206ENST00000491629 B4DGG1 531 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 BUB1O43683 1085 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 FUCA1P04066 466 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 PCCBP05166 539 aa13.31□□□□□ -0.28
USF1-206ENST00000491629 PLEKP08567 350 aaPredicted RBP13.31□□□□□ -0.28
USF1-206ENST00000491629 FGF3P11487 239 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms