RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 SMTNL2Q2TAL5 461 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 PRRT3Q5FWE3 981 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 LRRC73Q5JTD7 316 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 MARC1Q5VT66 337 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 CNGA4Q8IV77 575 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 VSTM4Q8IW00 320 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 LSMEM2Q8N112 164 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 KCTD6Q8NC69 237 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 MAPK15Q8TD08 544 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 NAT6Q93015 286 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 GRAMD1AQ96CP6 724 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 PEBP4Q96S96 227 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 SCUBE2Q9NQ36 999 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 UVRAGQ9P2Y5 699 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 LHX6Q9UPM6 363 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 KNL1Q8NG31 2342 aa16.69■□□□□ 0.26
PDLIM2-217ENST00000491330 CABIN1Q9Y6J0 2220 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 CPED1A4D0V7 1026 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 INSIG1O15503 277 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 AKR1B10O60218 316 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 SOCS5O75159 536 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 MT-CO3P00414 261 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 TNFP01375 233 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 RARAP10276 462 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 CYP2A6P11509 494 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 C6P13671 934 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 CES1P23141 567 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 ACTN2P35609 894 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 LIG3P49916 1009 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 MTM1Q13496 603 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 DPYSQ14117 519 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 NR0B2Q15466 257 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 AFMIDQ63HM1 303 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 TIGD7Q6NT04 549 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 LVRNQ6Q4G3 990 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 POLNQ7Z5Q5 900 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 GKN2Q86XP6 184 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 PHACTR4Q8IZ21 702 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 ARFGAP1Q8N6T3 406 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 PDCD6IPQ8WUM4 868 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 RFFLQ8WZ73 363 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 ZNF830Q96NB3 372 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 CSPG4P5Q96PW8 444 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 GPR27Q9NS67 375 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 GGT7Q9UJ14 662 aa16.68■□□□□ 0.26
PDLIM2-217ENST00000491330 PLXNA2O75051 1894 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 MAP1BP46821 2468 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 A0A087X0T9 212 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 CYP1A2P05177 515 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 FAM228BP0C875 321 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 AMPD1P23109 780 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 ADKP55263 362 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 ITKQ08881 620 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 PEX6Q13608 980 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 ARHGEF7Q14155 803 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 AGERQ15109 404 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 PDK2Q15119 407 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 SLC18A3Q16572 532 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 ENPP7Q6UWV6 458 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 NETO2Q8NC67 525 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 OR6C4Q8NGE1 309 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 ZNF564Q8TBZ8 553 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 APOOQ9BUR5 198 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 TRIM7Q9C029 511 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 KLQ9UEF7 1012 aa16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 COL5A1P20908 1838 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-217ENST00000491330 LMO7DNF2Z398 122 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 ZW10O43264 779 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 OPA1O60313 960 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 MX2P20592 715 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 IGFALSP35858 605 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 MMP12P39900 470 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 MMP13P45452 471 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 INSM1Q01101 510 aaPredicted RBP16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 SEMG2Q02383 582 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 CAMK2BQ13554 666 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 INPP5AQ14642 412 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 NFATC4Q14934 902 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 ACOX1Q15067 660 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 IRF4Q15306 451 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 DEFB133Q30KQ1 61 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 KDM7AQ6ZMT4 941 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 USP45Q70EL2 814 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 RD3Q7Z3Z2 195 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 HID1Q8IV36 788 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 ARHGAP12Q8IWW6 846 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 TP53I13Q8NBR0 393 aaPredicted RBP16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 IFI44Q8TCB0 444 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 CCDC42Q96M95 316 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 WDR92Q96MX6 357 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 NUDCD1Q96RS6 583 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 RAXQ9Y2V3 346 aa16.66■□□□□ 0.26
PDLIM2-217ENST00000491330 BUB1BO60566 1050 aaPredicted RBP16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 CPP00450 1065 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 PCCBP05166 539 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 HK3P52790 923 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 EPHB1P54762 984 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 SLC10A7Q0GE19 358 aa16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 EIF2B5Q13144 721 aaKnown RBP16.65■□□□□ 0.26
PDLIM2-217ENST00000491330 RTP5Q14D33 572 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms