RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 LRRC31Q6UY01 552 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 Q6ZSN1 163 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 MTSS1LQ765P7 747 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 PDZD4Q76G19 769 aaPredicted RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 KIAA1328Q86T90 577 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 EFCAB13Q8IY85 973 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 TCEAL8Q8IYN2 117 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 MMGT1Q8N4V1 131 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 ZNF808Q8N4W9 903 aaPredicted RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 AFAP1L2Q8N4X5 818 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 CLRN3Q8NCR9 226 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 OR6B3Q8NGW1 331 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 PARD3BQ8TEW8 1205 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 COG1Q8WTW3 980 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 ATOH1Q92858 354 aaPredicted RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 JAKMIP2Q96AA8 810 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 FAM81BQ96LP2 452 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 EIF3CQ99613 913 aaKnown RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 CHP1Q99653 195 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 SEPT5Q99719 369 aaPredicted RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 SOX7Q9BT81 388 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 FGFBP2Q9BYJ0 223 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 TTYH3Q9C0H2 523 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 KCTD10Q9H3F6 313 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 SLITRK6Q9H5Y7 841 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 FAM124BQ9H5Z6 455 aaPredicted RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 MMRN2Q9H8L6 949 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 TMEM8AQ9HCN3 771 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 WDR6Q9NNW5 1121 aaKnown RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 PCDH12Q9NPG4 1184 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 DMAC2Q9NW81 257 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 ZNHIT6Q9NWK9 470 aaKnown RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 GDAP2Q9NXN4 497 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 DDX43Q9NXZ2 648 aaKnown RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 UXTQ9UBK9 157 aaPredicted RBP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 CDH9Q9ULB4 789 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 HPCAL4Q9UM19 191 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 GUCA1BQ9UMX6 200 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.9□□□□□ -1.63
CSTF1-205ENST00000490539 ITPR3Q14573 2671 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 CLUHO75153 1309 aa4.9□□□□□ -1.63
CSTF1-205ENST00000490539 TRIP11Q15643 1979 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 WDR27A2RRH5 827 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 A6NNZ2 444 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 DCXO43602 365 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 SHOX2O60902 331 aaPredicted RBP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 TACC1O75410 805 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 RFPL2O75678 378 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 AKAP3O75969 853 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 SEC24DO94855 1032 aaPredicted RBP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 ABLIM3O94929 683 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 IPO7O95373 1038 aaKnown RBP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 ATP1A1P05023 1023 aaKnown RBP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 IL9P15248 144 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 GYPEP15421 78 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 PRLRP16471 622 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 ENPP1P22413 925 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 TBXAS1P24557 533 aaPredicted RBP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 TNFRSF8P28908 595 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 CDC25CP30307 473 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 HNRNPH3P31942 346 aaKnown RBP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 TNNT3P45378 269 aaPredicted RBP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 GCLMP48507 274 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 VAV2P52735 878 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 LGALS4P56470 323 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 TWF1Q12792 350 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 KCNC3Q14003 757 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 CDSNQ15517 529 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 TUBB8Q3ZCM7 444 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 ZACNQ401N2 412 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 CT83Q5H943 113 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 ANKRD40Q6AI12 368 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 VSTM1Q6UX27 236 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 CCNI2Q6ZMN8 369 aaPredicted RBP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 GBP6Q6ZN66 633 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 GET4Q7L5D6 327 aaPredicted RBP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 GRASPQ7Z6J2 395 aaPredicted RBP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 STRA8Q7Z7C7 330 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 SPATS2Q86XZ4 545 aaKnown RBP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 YAF2Q8IY57 180 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 C10orf67Q8IYJ2 551 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 UBALD2Q8IYN6 164 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 C12orf76Q8N812 135 aaPredicted RBP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 FBXL13Q8NEE6 735 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 OR5B17Q8NGF7 314 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 SUSD6Q92537 303 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 FUBP3Q96I24 572 aaKnown RBP eCLIP4.89□□□□□ -1.63
CSTF1-205ENST00000490539 FAXDC2Q96IV6 333 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 CEP295NLQ96MC4 621 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 PGLYRP2Q96PD5 576 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 ERGIC2Q96RQ1 377 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 MED10Q9BTT4 135 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 ELOVL4Q9GZR5 314 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 FAM107BQ9H098 131 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 ZCWPW1Q9H0M4 648 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 S1PR5Q9H228 398 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 VPS11Q9H270 941 aa4.89□□□□□ -1.63
CSTF1-205ENST00000490539 CXCL16Q9H2A7 254 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms