RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 ALG11Q2TAA5 492 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 PERM1Q5SV97 790 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 NCBP2-AS2Q69YL0 99 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 GUSBP11Q6P575 273 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 DPPA4Q7L190 304 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 SRLQ86TD4 932 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 VPS36Q86VN1 386 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 SFTPA2Q8IWL1 248 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 SLC35F3Q8IY50 421 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 RYBPQ8N488 228 aaPredicted RBP11.91□□□□□ -0.5
SRSF4-204ENST00000489898 FAM174AQ8TBP5 190 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 HCAR2Q8TDS4 363 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 TEKT4Q8WW24 435 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 FEM1CQ96JP0 617 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 TUBGCP5Q96RT8 1024 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 DNAJC7Q99615 494 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 SUV39H2Q9H5I1 410 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 SCUBE2Q9NQ36 999 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 DNAJC28Q9NX36 388 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 MYO1AQ9UBC5 1043 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 IPO11Q9UI26 975 aaKnown RBP11.91□□□□□ -0.5
SRSF4-204ENST00000489898 RABGEF1Q9UJ41 708 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 HPCAL4Q9UM19 191 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 ATP8A1Q9Y2Q0 1164 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 ST14Q9Y5Y6 855 aa11.91□□□□□ -0.5
SRSF4-204ENST00000489898 PRPSAP2O60256 369 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 FZD6O60353 706 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 TGM2P21980 687 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 CASP14P31944 242 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 LIG3P49916 1009 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 DPYSL3Q14195 570 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 ACAP1Q15027 740 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 ATP13A4Q4VNC1 1196 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 CCDC157Q569K6 752 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 TDRD12Q587J7 1177 aaKnown RBP11.9□□□□□ -0.5
SRSF4-204ENST00000489898 TMCO4Q5TGY1 634 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 BRAT1Q6PJG6 821 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 LIPIQ6XZB0 460 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 DCP2Q8IU60 420 aaKnown RBP11.9□□□□□ -0.5
SRSF4-204ENST00000489898 PHACTR4Q8IZ21 702 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 TEX26Q8N6G2 289 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 PQLC3Q8N755 202 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
SRSF4-204ENST00000489898 PCDH19Q8TAB3 1148 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 TRIM11Q96F44 468 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 PRR11Q96HE9 360 aaPredicted RBP11.9□□□□□ -0.5
SRSF4-204ENST00000489898 COQ10AQ96MF6 247 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 ZNF641Q96N77 438 aaPredicted RBP11.9□□□□□ -0.5
SRSF4-204ENST00000489898 MCCC1Q96RQ3 725 aaPredicted RBP11.9□□□□□ -0.5
SRSF4-204ENST00000489898 NUP85Q9BW27 656 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 FGF22Q9HCT0 170 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 ANAPC7Q9UJX3 599 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 CSNK1G3Q9Y6M4 447 aa11.9□□□□□ -0.5
SRSF4-204ENST00000489898 A0A0U1RQS6 177 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 EME2A4GXA9 379 aaPredicted RBP11.89□□□□□ -0.51
SRSF4-204ENST00000489898 ANKRD62A6NC57 917 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 ARHGAP42A6NI28 874 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 C3orf70A6NLC5 250 aaPredicted RBP11.89□□□□□ -0.51
SRSF4-204ENST00000489898 FPGTO14772 594 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 AQP9O43315 295 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 OPA1O60313 960 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 TM7SF2O76062 418 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 SERPINC1P01008 464 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 FUCA1P04066 466 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 GP1BAP07359 652 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 SUOXP51687 545 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 ZNF135P52742 658 aaPredicted RBP11.89□□□□□ -0.51
SRSF4-204ENST00000489898 UBASH3AP57075 661 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 HNRNPKP61978 463 aaKnown RBP eCLIP11.89□□□□□ -0.51
SRSF4-204ENST00000489898 YPEL5P62699 121 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 SKOR1P84550 965 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 NSUN2Q08J23 767 aaKnown RBP eCLIP11.89□□□□□ -0.51
SRSF4-204ENST00000489898 CCDC15Q0P6D6 951 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 GALNT2Q10471 571 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 LBRQ14739 615 aaKnown RBP11.89□□□□□ -0.51
SRSF4-204ENST00000489898 CNGA3Q16281 694 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 COL28A1Q2UY09 1125 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 DEFB133Q30KQ1 61 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 FILIP1LQ4L180 1135 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 FAM182AQ5T1J6 154 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 ZCCHC8Q6NZY4 707 aaKnown RBP11.89□□□□□ -0.51
SRSF4-204ENST00000489898 TTC7BQ86TV6 843 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 SNIP1Q8TAD8 396 aaKnown RBP11.89□□□□□ -0.51
SRSF4-204ENST00000489898 OR1E3Q8WZA6 343 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 MAML1Q92585 1016 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 ZNF599Q96NL3 588 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 ASCL3Q9NQ33 180 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 B4GALT6Q9UBX8 382 aa11.89□□□□□ -0.51
SRSF4-204ENST00000489898 APOBEC3BQ9UH17 382 aaKnown RBP11.89□□□□□ -0.51
SRSF4-204ENST00000489898 PIEZO2Q9H5I5 2752 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 TMEM202A6NGA9 273 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 NPIPB15A6NHN6 443 aaPredicted RBP11.88□□□□□ -0.51
SRSF4-204ENST00000489898 LMO7DNF2Z398 122 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 DFFAO00273 331 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 BRINP1O60477 761 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 RNF8O76064 485 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 TSHRP16473 764 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 JUNDP17535 347 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 TRIM23P36406 574 aa11.88□□□□□ -0.51
SRSF4-204ENST00000489898 EIF4A3P38919 411 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms