RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 TTKP33981 857 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 GRK5P34947 590 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 PRKCIP41743 596 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 MMP13P45452 471 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 CDH8P55286 799 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 EVCP57679 992 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 EIF4A1P60842 406 aaKnown RBP3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 UFM1P61960 85 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 PSG6Q00889 435 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 YWHAHQ04917 246 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 HYAL1Q12794 435 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 C5orf22Q49AR2 442 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 ZNF766Q5HY98 468 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 PLEKHS1Q5SXH7 462 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 NAPEPLDQ6IQ20 393 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 KLHL35Q6PF15 583 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 NCEH1Q6PIU2 408 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 ZER1Q7Z7L7 766 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 AACSQ86V21 672 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 KBTBD6Q86V97 674 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 OR4N4Q8N0Y3 316 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 POC5Q8NA72 575 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 POGLUT1Q8NBL1 392 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 TMEM116Q8NCL8 245 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 MAFAQ8NHW3 353 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 CLEC4CQ8WTT0 213 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 ZDHHC12Q96GR4 267 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 IWS1Q96ST2 819 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 ZCWPW1Q9H0M4 648 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 THAP9Q9H5L6 903 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 COPS7BQ9H9Q2 264 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 VEZTQ9HBM0 779 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 ELOVL5Q9NYP7 299 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 WSB2Q9NYS7 404 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 RABL2AQ9UBK7 228 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 LIMA1Q9UHB6 759 aaKnown RBP3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 SH3BGRL2Q9UJC5 107 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 AGTPBP1Q9UPW5 1226 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 GDAQ9Y2T3 454 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 CAPN7Q9Y6W3 813 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 KDM6BO15054 1643 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 FANCAO15360 1455 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 CCDC18Q5T9S5 1454 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 NEO1Q92859 1461 aa3.32□□□□□ -1.88
DEPDC1-204ENST00000489862 SYNRGQ9UMZ2 1314 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 MAP3K1Q13233 1512 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 CDC42BPAQ5VT25 1732 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 TRAV34A0A0B4J273 112 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 RGSL1A5PLK6 1076 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 KRT87PA6NCN2 255 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 CCDC69A6NI79 296 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 SH2D7A6NKC9 451 aaPredicted RBP3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 MPHOSPH10O00566 681 aaKnown RBP3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 CTDSP2O14595 271 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 ADAMDEC1O15204 470 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 SMPD2O60906 423 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 TADA2AO75478 443 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 SEC31AO94979 1220 aaKnown RBP3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 OLFM2O95897 454 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 TPM2P07951 284 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 WEE2P0C1S8 567 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 SUPT20HL2P0C7V6 817 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 GABRB1P18505 474 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 AGAP20933 346 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 BSGP35613 385 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 RABIFP47224 123 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 NRIP1P48552 1158 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 ARFIP1P53367 373 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 CDH15P55291 814 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 HDAC4P56524 1084 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 RNASELQ05823 741 aaKnown RBP3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 RABEP1Q15276 862 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 MAJINQ3KP22 176 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 TTC31Q49AM3 519 aaPredicted RBP3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 CERKLQ49MI3 558 aaPredicted RBP3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 SLC30A9Q6PML9 568 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 MTHFD1LQ6UB35 978 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 BCDIN3DQ7Z5W3 292 aaKnown RBP3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 TRABD2AQ86V40 505 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 UNC45BQ8IWX7 931 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 TBC1D21Q8IYX1 336 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 ADGRF2Q8IZF7 708 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 ZBTB44Q8NCP5 570 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 DNAJB14Q8TBM8 379 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 DUSP19Q8WTR2 217 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 MASTLQ96GX5 879 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 NLRP4Q96MN2 994 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 MMS19Q96T76 1030 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 ATP6V0BQ99437 205 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 MAK16Q9BXY0 300 aaKnown RBP3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 FUT8Q9BYC5 575 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 DNAI2Q9GZS0 605 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 CLPBQ9H078 707 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 CCDC134Q9H6E4 229 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 BEX4Q9NWD9 120 aaPredicted RBP3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 HPF1Q9NWY4 346 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 ADPRHL2Q9NX46 363 aa3.31□□□□□ -1.88
DEPDC1-204ENST00000489862 ASIC5Q9NY37 505 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms