RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 ZDHHC11BP0C7U3 371 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 COILP38432 576 aaPredicted RBP9.9□□□□□ -0.83
NOD1-208ENST00000489614 MAP3K7CLP57077 242 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 KRT17Q04695 432 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 SUZ12Q15022 739 aaKnown RBP9.9□□□□□ -0.83
NOD1-208ENST00000489614 SLC25A52Q3SY17 297 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 ATP13A4Q4VNC1 1196 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 HFE2Q6ZVN8 426 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 ANKRD13BQ86YJ7 626 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 PSTKQ8IV42 348 aaKnown RBP9.9□□□□□ -0.83
NOD1-208ENST00000489614 THEM5Q8N1Q8 247 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 LSMEM1Q8N8F7 131 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 RILPQ96NA2 401 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 C17orf80Q9BSJ5 609 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 HAUS8Q9BT25 410 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 TTLL2Q9BWV7 592 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 MANSC1Q9H8J5 431 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 FANCEQ9HB96 536 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 WDR70Q9NW82 654 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 RANBP2P49792 3224 aaKnown RBP9.9□□□□□ -0.83
NOD1-208ENST00000489614 C2orf16Q68DN1 1984 aa9.9□□□□□ -0.83
NOD1-208ENST00000489614 PRR5-ARHGAP8B1AHC4 643 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 SOD2P04179 222 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 CXCR2P25025 360 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 PSMA2P25787 234 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 ARHGAP8P85298 464 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 UBAP2LQ14157 1087 aaKnown RBP9.89□□□□□ -0.83
NOD1-208ENST00000489614 SPOCD1Q6ZMY3 1216 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 DDX53Q86TM3 631 aaKnown RBP9.89□□□□□ -0.83
NOD1-208ENST00000489614 SETD3Q86TU7 594 aaPredicted RBP9.89□□□□□ -0.83
NOD1-208ENST00000489614 HPS6Q86YV9 775 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 CFAP57Q96MR6 1250 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 PLK2Q9NYY3 685 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 LRFN2Q9ULH4 789 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 ERGIC3Q9Y282 383 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 CHD9Q3L8U1 2897 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 MYLKQ15746 1914 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 MTMR11A4FU01 709 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 ZNF23P17027 643 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 KDELR1P24390 212 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 GRK2P25098 689 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 XIAPP98170 497 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 PPP2R2BQ00005 443 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 TRAF2Q12933 501 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 DPYSL2Q16555 572 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 NRF1Q16656 503 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 DNAL1Q4LDG9 190 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 GPR107Q5VW38 600 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 BTLAQ7Z6A9 289 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 SCD5Q86SK9 330 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 ADGRG6Q86SQ4 1221 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 CPSF7Q8N684 471 aaKnown RBP9.89□□□□□ -0.83
NOD1-208ENST00000489614 ATG4AQ8WYN0 398 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 HDAC2Q92769 488 aaKnown RBP9.89□□□□□ -0.83
NOD1-208ENST00000489614 TBCBQ99426 244 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 FAM118BQ9BPY3 351 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 TRIM56Q9BRZ2 755 aaKnown RBP9.89□□□□□ -0.83
NOD1-208ENST00000489614 SLC17A7Q9P2U7 560 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 LGALS13Q9UHV8 139 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 ANAPC5Q9UJX4 755 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 FZD10Q9ULW2 581 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 SCML2Q9UQR0 700 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 COL4A3Q01955 1670 aa9.89□□□□□ -0.83
NOD1-208ENST00000489614 YJEFN3A6XGL0 299 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 GOLGA8SH3BPF8 625 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 SPOPO43791 374 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 HAPLN1P10915 354 aaPredicted RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 PRKCAP17252 672 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 NOS2P35228 1153 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 MSX2P35548 267 aaPredicted RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 PGFP49763 221 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 TKTL1P51854 596 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 RABGGTBP53611 331 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 EIF3EP60228 445 aaKnown RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 PHC1P78364 1004 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 PEX6Q13608 980 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 OR6B2Q6IFH4 312 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 MSANTD2Q6P1R3 559 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 GALNT18Q6P9A2 607 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 GPR141Q7Z602 305 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 GPR180Q86V85 440 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 TTC13Q8NBP0 860 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 TTC17Q96AE7 1141 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 VPS35Q96QK1 796 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 SLC9A7Q96T83 725 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 TMEM106CQ9BVX2 250 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 ULBP1Q9BZM6 244 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 C10orf88Q9H8K7 445 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 TRIM39Q9HCM9 518 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 MAFFQ9ULX9 164 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 USP18Q9UMW8 372 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 LAMA3Q16787 3333 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 TADA2AO75478 443 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 DLDP09622 509 aaKnown RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 ZNF182P17025 639 aaPredicted RBP9.88□□□□□ -0.83
NOD1-208ENST00000489614 CTAG1AP78358 180 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 PPIGQ13427 754 aaKnown RBP eCLIP9.88□□□□□ -0.83
NOD1-208ENST00000489614 DPYSL3Q14195 570 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 SLC9A4Q6AI14 798 aa9.88□□□□□ -0.83
NOD1-208ENST00000489614 KCNT2Q6UVM3 1135 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms