RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 SERTAD1Q9UHV2 236 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 HOOK1Q9UJC3 728 aaKnown RBP7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 NOL7Q9UMY1 257 aaKnown RBP7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 AGAP1Q9UPQ3 857 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 NME7Q9Y5B8 376 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 USF3Q68DE3 2245 aa7.58□□□□□ -1.2
EXOSC3-206ENST00000489414 SEC16AO15027 2179 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 ARID1AO14497 2285 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 GOLGA6L6A8MZA4 724 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 ZW10O43264 779 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 CCNT1O60563 726 aaKnown RBP7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 CUTAO60888 179 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 MED24O75448 989 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 BMP15O95972 392 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 HMBSP08397 361 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 TRIM49P0CI25 452 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 TRIM49CP0CI26 452 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 MAPTP10636 758 aaKnown RBP7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 WARSP23381 471 aaKnown RBP7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 CMA1P23946 247 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 KRT2P35908 639 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 RPS21P63220 83 aaKnown RBP7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 KRTAP1-1Q07627 177 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 MYBPHQ13203 477 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 SLC39A14Q15043 492 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 STX1AQ16623 288 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 KMT5BQ4FZB7 885 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 EFHC1Q5JVL4 640 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 TMEM71Q6P5X7 295 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 TREML4Q6UXN2 200 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 LIAT1Q6ZQX7 453 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 RBM43Q6ZSC3 357 aaKnown RBP7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 MED25Q71SY5 747 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 DIS3L2Q8IYB7 885 aaKnown RBP7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 TMEM161BQ8NDZ6 487 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 OR8D1Q8WZ84 308 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 TMA16Q96EY4 203 aaKnown RBP7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 AIFM3Q96NN9 605 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 DDX50Q9BQ39 737 aaKnown RBP7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 WDR77Q9BQA1 342 aaPredicted RBP7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 NTPCRQ9BSD7 190 aaKnown RBP7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 B3GNT5Q9BYG0 378 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 AMBRA1Q9C0C7 1298 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 CLEC4MQ9H2X3 399 aaPredicted RBP7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 ZBTB20Q9HC78 741 aaPredicted RBP7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 LHX9Q9NQ69 397 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 LRFN1Q9P244 771 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 PADI1Q9ULC6 663 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 PCDHA7Q9UN72 937 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 CLIC4Q9Y696 253 aa7.57□□□□□ -1.2
EXOSC3-206ENST00000489414 ESPNB1AK53 854 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 B4DGG1 531 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 GOLGA6L19H0YKK7 550 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 S1PR4O95977 384 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 CCNYL3P0C7X3 344 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 ESRRAP11474 423 aaPredicted RBP7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 CA5AP35218 305 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 GPR3P46089 330 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 YPEL5P62699 121 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 TPM4P67936 248 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 ECT2LQ008S8 904 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 CENPCQ03188 943 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 NPY5RQ15761 445 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 E2F4Q16254 413 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 ALG11Q2TAA5 492 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 B3GNTL1Q67FW5 361 aaPredicted RBP7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 KIAA1161Q6NSJ0 714 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 C17orf82Q86X59 251 aaPredicted RBP7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 HIPK1Q86Z02 1210 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 WDR49Q8IV35 697 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 HID1Q8IV36 788 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 BLIDQ8IZY5 108 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 FAM177A1Q8N128 213 aaPredicted RBP7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 C1orf127Q8N9H9 656 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 DENND6BQ8NEG7 585 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 FAM46DQ8NEK8 389 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 SGMS2Q8NHU3 365 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 FRS2Q8WU20 508 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 PDLIM2Q96JY6 352 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 RPL10LQ96L21 214 aaKnown RBP7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 RBM15Q96T37 977 aaKnown RBP eCLIP7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 BDH2Q9BUT1 245 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 ZNF552Q9H707 407 aaPredicted RBP7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 GPAMQ9HCL2 828 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 DMAP1Q9NPF5 467 aaPredicted RBP7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 SH3GLB2Q9NR46 395 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 ANO10Q9NW15 660 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 SIDT1Q9NXL6 827 aaKnown RBP7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 FAM13BQ9NYF5 915 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 STOML2Q9UJZ1 356 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 PLEKHM1Q9Y4G2 1056 aa7.56□□□□□ -1.2
EXOSC3-206ENST00000489414 IGHV1OR21-1A0A087WYE8 117 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 A0A1W2PQH9 124 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 RHPN2P1A8MT19 583 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 BECN2A8MW95 431 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 ALOX15BO15296 676 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 HIP1RO75146 1068 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 KIAA0754O94854 1291 aa7.55□□□□□ -1.2
EXOSC3-206ENST00000489414 TPM3P06753 285 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms