RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 ZSCAN12O43309 604 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 PRLP01236 227 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 GNSP15586 552 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 ITIH2P19823 946 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 CD68P34810 354 aaPredicted RBP18.78■□□□□ 0.6
PTCD3-217ENST00000488801 RPS21P63220 83 aaKnown RBP18.78■□□□□ 0.6
PTCD3-217ENST00000488801 SKOR1P84550 965 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 RPS6KA1Q15418 735 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 FAM182AQ5T1J6 154 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 DPPA4Q7L190 304 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 TTC7BQ86TV6 843 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 PRPF39Q86UA1 669 aaKnown RBP18.78■□□□□ 0.6
PTCD3-217ENST00000488801 KIAA2013Q8IYS2 634 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 PIH1D2Q8WWB5 315 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 HTR3CQ8WXA8 447 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 SLC6A18Q96N87 628 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 VAT1Q99536 393 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 PYCARDQ9ULZ3 195 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 RAI2Q9Y5P3 530 aa18.78■□□□□ 0.6
PTCD3-217ENST00000488801 COL5A1P20908 1838 aaPredicted RBP18.77■□□□□ 0.6
PTCD3-217ENST00000488801 USP27XA6NNY8 438 aa18.77■□□□□ 0.6
PTCD3-217ENST00000488801 PCDH8O95206 1070 aa18.77■□□□□ 0.6
PTCD3-217ENST00000488801 WNT1P04628 370 aa18.77■□□□□ 0.6
PTCD3-217ENST00000488801 MAT2AP31153 395 aaKnown RBP18.77■□□□□ 0.6
PTCD3-217ENST00000488801 AFF3P51826 1226 aaKnown RBP18.77■□□□□ 0.6
PTCD3-217ENST00000488801 LIMK1P53667 647 aa18.77■□□□□ 0.6
PTCD3-217ENST00000488801 LMNB2Q03252 620 aa18.77■□□□□ 0.6
PTCD3-217ENST00000488801 AGERQ15109 404 aa18.77■□□□□ 0.6
PTCD3-217ENST00000488801 SEL1L2Q5TEA6 688 aa18.77■□□□□ 0.6
PTCD3-217ENST00000488801 TTC13Q8NBP0 860 aa18.77■□□□□ 0.6
PTCD3-217ENST00000488801 SLC35B2Q8TB61 432 aa18.77■□□□□ 0.6
PTCD3-217ENST00000488801 FEM1CQ96JP0 617 aa18.77■□□□□ 0.6
PTCD3-217ENST00000488801 KLF6Q99612 283 aaPredicted RBP18.77■□□□□ 0.6
PTCD3-217ENST00000488801 MIR1-1HGQ9H1L0 117 aa18.77■□□□□ 0.6
PTCD3-217ENST00000488801 SLC25A51Q9H1U9 297 aa18.77■□□□□ 0.6
PTCD3-217ENST00000488801 GPR27Q9NS67 375 aa18.77■□□□□ 0.6
PTCD3-217ENST00000488801 R3HDM2Q9Y2K5 976 aaKnown RBP18.77■□□□□ 0.6
PTCD3-217ENST00000488801 CFAP69A5D8W1 941 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 CPP00450 1065 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 PDHA1P08559 390 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 RBP3P10745 1247 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 GM2AP17900 193 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 RBL1P28749 1068 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 EIF3EP60228 445 aaKnown RBP18.76■□□□□ 0.59
PTCD3-217ENST00000488801 POLR2LP62875 67 aaKnown RBP18.76■□□□□ 0.59
PTCD3-217ENST00000488801 GRIK2Q13002 908 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 SIX1Q15475 284 aaPredicted RBP18.76■□□□□ 0.59
PTCD3-217ENST00000488801 CFAP58Q5T655 872 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 ARMC12Q5T9G4 340 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 IQCHQ86VS3 1027 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 SLC13A5Q86YT5 568 aaPredicted RBP18.76■□□□□ 0.59
PTCD3-217ENST00000488801 CDKL3Q8IVW4 592 aaPredicted RBP18.76■□□□□ 0.59
PTCD3-217ENST00000488801 ZNF567Q8N184 647 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 DENND6BQ8NEG7 585 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 SERAC1Q96JX3 654 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 AGAP3Q96P47 875 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 LENG8Q96PV6 779 aaPredicted RBP18.76■□□□□ 0.59
PTCD3-217ENST00000488801 TRIB3Q96RU7 358 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 NUSAP1Q9BXS6 441 aaKnown RBP18.76■□□□□ 0.59
PTCD3-217ENST00000488801 SLC17A9Q9BYT1 436 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 USP29Q9HBJ7 922 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 GLOD4Q9HC38 313 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 SEPT10Q9P0V9 454 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 PHTF1Q9UMS5 762 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 PCDHB9Q9Y5E1 797 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 CACNA1AO00555 2505 aa18.76■□□□□ 0.59
PTCD3-217ENST00000488801 GOLGA4Q13439 2230 aaKnown RBP18.76■□□□□ 0.59
PTCD3-217ENST00000488801 ARHGEF17Q96PE2 2063 aaPredicted RBP18.75■□□□□ 0.59
PTCD3-217ENST00000488801 GOLGA6L9A6NEM1 432 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 IGLON5A6NGN9 336 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 PRAMEF26H0Y7S4 382 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 ARHGAP33O14559 1287 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 CDX4O14627 284 aaPredicted RBP18.75■□□□□ 0.59
PTCD3-217ENST00000488801 VILLO15195 856 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 GDF9O60383 454 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 PRKCGP05129 697 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 CFIP05156 583 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 PRLRP16471 622 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 ENGP17813 658 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 HNRNPA2B1P22626 353 aaKnown RBP18.75■□□□□ 0.59
PTCD3-217ENST00000488801 CD86P42081 329 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 RPL26P61254 145 aaKnown RBP18.75■□□□□ 0.59
PTCD3-217ENST00000488801 ITKQ08881 620 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 ERAP2Q6P179 960 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 LAYNQ6UX15 382 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 GCNT7Q6ZNI0 430 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 ABI3BPQ7Z7G0 1075 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 CBARPQ8N350 705 aaPredicted RBP18.75■□□□□ 0.59
PTCD3-217ENST00000488801 C12orf50Q8NA57 414 aaPredicted RBP18.75■□□□□ 0.59
PTCD3-217ENST00000488801 FAM118BQ9BPY3 351 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 GORASP1Q9BQQ3 440 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 EDEM2Q9BV94 578 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 FSCN3Q9NQT6 498 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 KCND1Q9NSA2 647 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 B4GALT6Q9UBX8 382 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 RPL26L1Q9UNX3 145 aaKnown RBP18.75■□□□□ 0.59
PTCD3-217ENST00000488801 JRKLQ9Y4A0 524 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 TTLL3Q9Y4R7 772 aa18.75■□□□□ 0.59
PTCD3-217ENST00000488801 A0A0J9YYE9 177 aa18.74■□□□□ 0.59
PTCD3-217ENST00000488801 H7C0C1 242 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms