RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 RNPS1Q15287 305 aaKnown RBP3.38□□□□□ -1.87
CD46-215ENST00000488596 MED22Q15528 200 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 HSPB2Q16082 182 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 GSTA3Q16772 222 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 DUSP6Q16828 381 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 SOWAHAQ2M3V2 549 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 COL28A1Q2UY09 1125 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 PLEKHO1Q53GL0 409 aaPredicted RBP3.38□□□□□ -1.87
CD46-215ENST00000488596 WDR78Q5VTH9 848 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 DCAF12L2Q5VW00 463 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 TXNDC8Q6A555 127 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 HIST2H2BCQ6DN03 193 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 HIST2H2BDQ6DRA6 164 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 CDC73Q6P1J9 531 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 FBXO46Q6PJ61 603 aaPredicted RBP3.38□□□□□ -1.87
CD46-215ENST00000488596 Q6ZTK2 550 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 ZNF367Q7RTV3 350 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 RBFAQ8N0V3 343 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 ZCCHC9Q8N567 271 aaKnown RBP3.38□□□□□ -1.87
CD46-215ENST00000488596 ZMIZ2Q8NF64 920 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 GJC3Q8NFK1 279 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 GABPB2Q8TAK5 448 aaPredicted RBP3.38□□□□□ -1.87
CD46-215ENST00000488596 ETNPPLQ8TBG4 499 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 SLC35F5Q8WV83 523 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 TMEM18Q96B42 140 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 GFM1Q96RP9 751 aaKnown RBP3.38□□□□□ -1.87
CD46-215ENST00000488596 SIN3AQ96ST3 1273 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 CDT1Q9H211 546 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 MRPL44Q9H9J2 332 aaKnown RBP3.38□□□□□ -1.87
CD46-215ENST00000488596 PLEKHA5Q9HAU0 1116 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 INTS6Q9UL03 887 aaKnown RBP3.38□□□□□ -1.87
CD46-215ENST00000488596 FAM96BQ9Y3D0 163 aa3.38□□□□□ -1.87
CD46-215ENST00000488596 FAM237BA0A1B0GVD1 139 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 PI4KAP2A4QPH2 592 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 LRRC53A6NM62 1247 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 CHL1O00533 1208 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 EBAG9O00559 213 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 SEC14L5O43304 696 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 LDB2O43679 373 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 DOK2O60496 412 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 RNASEH2AO75792 299 aaKnown RBP3.37□□□□□ -1.87
CD46-215ENST00000488596 TFP02787 698 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 CYP1A2P05177 515 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 NGFRP08138 427 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 MYZAPP0CAP1 466 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 TGFB3P10600 412 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 CHMP24386 653 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 MT3P25713 68 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 NFKBIAP25963 317 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 TNFRSF8P28908 595 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 RARSP54136 660 aaKnown RBP3.37□□□□□ -1.87
CD46-215ENST00000488596 RPL7AP62424 266 aaKnown RBP3.37□□□□□ -1.87
CD46-215ENST00000488596 SETQ01105 290 aaPredicted RBP3.37□□□□□ -1.87
CD46-215ENST00000488596 ITGADQ13349 1161 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 MYBPC2Q14324 1141 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 GPR18Q14330 331 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 FRG1Q14331 258 aaKnown RBP3.37□□□□□ -1.87
CD46-215ENST00000488596 HIST2H2ACQ16777 129 aaPredicted RBP3.37□□□□□ -1.87
CD46-215ENST00000488596 ESCO2Q56NI9 601 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 HYIQ5T013 277 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 SNX30Q5VWJ9 437 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 C4orf50Q6ZRC1 276 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 Q6ZSV7 163 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 TRAPPC11Q7Z392 1133 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 PXKQ7Z7A4 578 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 NGEFQ8N5V2 710 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 PARP16Q8N5Y8 322 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 TEX45Q8NA69 505 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 C7orf57Q8NEG2 295 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 LPAR1Q92633 364 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 INTS12Q96CB8 462 aaKnown RBP3.37□□□□□ -1.87
CD46-215ENST00000488596 URB1-AS1Q96HZ7 61 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 APOLD1Q96LR9 279 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 WDFY2Q96P53 400 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 MXRA8Q9BRK3 442 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 H2AFJQ9BTM1 129 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 MSTO1Q9BUK6 570 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 ITPAQ9BY32 194 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 TKTL2Q9H0I9 626 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 PRKRIP1Q9H875 184 aaPredicted RBP3.37□□□□□ -1.87
CD46-215ENST00000488596 CARD8Q9Y2G2 431 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 KCNE2Q9Y6J6 123 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 SCINQ9Y6U3 715 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 A3GALT2U3KPV4 340 aa3.37□□□□□ -1.87
CD46-215ENST00000488596 TDRD9Q8NDG6 1382 aaKnown RBP3.37□□□□□ -1.87
CD46-215ENST00000488596 RPS10-NUDT3A0A1W2PQS6 291 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 GAGE12JA6NER3 117 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 IFITM10A6NMD0 228 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 PRSS47A8MTI9 375 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 EIF3CLB5ME19 914 aaKnown RBP3.36□□□□□ -1.87
CD46-215ENST00000488596 F5H0A9 414 aaPredicted RBP3.36□□□□□ -1.87
CD46-215ENST00000488596 BCAT2O15382 392 aaPredicted RBP3.36□□□□□ -1.87
CD46-215ENST00000488596 KRT86O43790 486 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 KLK8O60259 260 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 SEC14L2O76054 403 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 DDX58O95786 925 aaKnown RBP3.36□□□□□ -1.87
CD46-215ENST00000488596 MMP3P08254 477 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 IRF1P10914 325 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 PCNAP12004 261 aa3.36□□□□□ -1.87
CD46-215ENST00000488596 RARGP13631 454 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms