RNA–Protein interactions for RNA: ENST00000488311.1

PLD3-213, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 750 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-213ENST00000488311 OR1A2Q9Y585 309 aa12.38□□□□□ -0.43
PLD3-213ENST00000488311 PCDHB1Q9Y5F3 818 aa12.38□□□□□ -0.43
PLD3-213ENST00000488311 ADAMTS20P59510 1910 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 H3BRJ5 948 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 PCCBP05166 539 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 CKMT1AP12532 417 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 JUPP14923 745 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 CR2P20023 1033 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 HNRNPKP61978 463 aaKnown RBP eCLIP12.37□□□□□ -0.43
PLD3-213ENST00000488311 TPM4P67936 248 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 DAB2P98082 770 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 PIGHQ14442 188 aaPredicted RBP12.37□□□□□ -0.43
PLD3-213ENST00000488311 LBRQ14739 615 aaKnown RBP12.37□□□□□ -0.43
PLD3-213ENST00000488311 GUSBP11Q6P575 273 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 CRTC1Q6UUV9 634 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 PHACTR4Q8IZ21 702 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 RNF214Q8ND24 703 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 ZNF564Q8TBZ8 553 aaPredicted RBP12.37□□□□□ -0.43
PLD3-213ENST00000488311 SPOCK2Q92563 424 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 TSACCQ96A04 125 aaPredicted RBP12.37□□□□□ -0.43
PLD3-213ENST00000488311 IFT43Q96FT9 208 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 APOBEC3BQ9UH17 382 aaKnown RBP12.37□□□□□ -0.43
PLD3-213ENST00000488311 ATP8A1Q9Y2Q0 1164 aa12.37□□□□□ -0.43
PLD3-213ENST00000488311 BZW2Q9Y6E2 419 aaKnown RBP12.37□□□□□ -0.43
PLD3-213ENST00000488311 RP1P56715 2156 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 FAM208BQ5VWN6 2430 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 AQP9O43315 295 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 TLX3O43711 291 aaPredicted RBP12.36□□□□□ -0.43
PLD3-213ENST00000488311 C1SP09871 688 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 XPAP23025 273 aaPredicted RBP12.36□□□□□ -0.43
PLD3-213ENST00000488311 HNRNPH3P31942 346 aaKnown RBP12.36□□□□□ -0.43
PLD3-213ENST00000488311 CSNK1DP48730 415 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 CDH6P55285 790 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 TRAF2Q12933 501 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 DPYSL3Q14195 570 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 INPP5AQ14642 412 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 ACAP1Q15027 740 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 LRRC14Q15048 493 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 CDKN3Q16667 212 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 ALG11Q2TAA5 492 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 BOLA3Q53S33 107 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 PRRT3Q5FWE3 981 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 PERM1Q5SV97 790 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 TMCO4Q5TGY1 634 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 NCBP2-AS2Q69YL0 99 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 BRAT1Q6PJG6 821 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 TMCO3Q6UWJ1 677 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 LIPIQ6XZB0 460 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 MACC1Q6ZN28 852 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 DCP2Q8IU60 420 aaKnown RBP12.36□□□□□ -0.43
PLD3-213ENST00000488311 SFTPA2Q8IWL1 248 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
PLD3-213ENST00000488311 FAM71BQ8TC56 605 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 TEKT4Q8WW24 435 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 RFFLQ8WZ73 363 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 PDXPQ96GD0 296 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 ZNF641Q96N77 438 aaPredicted RBP12.36□□□□□ -0.43
PLD3-213ENST00000488311 PSKH2Q96QS6 385 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 TUBGCP5Q96RT8 1024 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 CHP1Q99653 195 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 ATP13A3Q9H7F0 1226 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 NOD2Q9HC29 1040 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 IP6K2Q9UHH9 426 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 PCDHGC4Q9Y5F7 938 aa12.36□□□□□ -0.43
PLD3-213ENST00000488311 URB1O60287 2271 aaKnown RBP12.36□□□□□ -0.43
PLD3-213ENST00000488311 A0A1W2PNU3 283 aaPredicted RBP12.35□□□□□ -0.43
PLD3-213ENST00000488311 PMS2P1A4D2B8 440 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 RECQL5O94762 991 aaPredicted RBP12.35□□□□□ -0.43
PLD3-213ENST00000488311 TSHRP16473 764 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 TGM2P21980 687 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 LHCGRP22888 699 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 SERPINA4P29622 427 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 ARL4AP40617 200 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 SSR1P43307 286 aaKnown RBP12.35□□□□□ -0.43
PLD3-213ENST00000488311 THOP1P52888 689 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 ADKP55263 362 aaKnown RBP12.35□□□□□ -0.43
PLD3-213ENST00000488311 BCL2L1Q07817 233 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 ELP6Q0PNE2 266 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 ILKQ13418 452 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 RFTN1Q14699 578 aaPredicted RBP12.35□□□□□ -0.43
PLD3-213ENST00000488311 COL28A1Q2UY09 1125 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 CDCP2Q5VXM1 449 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 RFLNAQ6ZTI6 216 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 DPPA4Q7L190 304 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 ZSCAN30Q86W11 494 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 SLC35F3Q8IY50 421 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 DCBLD1Q8N8Z6 715 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 FAM181AQ8N9Y4 354 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 PCDH19Q8TAB3 1148 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 FAM174AQ8TBP5 190 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 IFI44Q8TCB0 444 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 HCAR2Q8TDS4 363 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 HNRNPLLQ8WVV9 542 aaKnown RBP12.35□□□□□ -0.43
PLD3-213ENST00000488311 DNAJC7Q99615 494 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 MGME1Q9BQP7 344 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 LGR4Q9BXB1 951 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 MRPL40Q9NQ50 206 aaKnown RBP12.35□□□□□ -0.43
PLD3-213ENST00000488311 SPTLC3Q9NUV7 552 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 DKK4Q9UBT3 224 aa12.35□□□□□ -0.43
PLD3-213ENST00000488311 B4GALT6Q9UBX8 382 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms