RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 PRR33A8MZF0 331 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 TRIM49D1C9J1S8 452 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 DLGAP1O14490 977 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 CLIC2O15247 247 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ZBTB14O43829 449 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 MARCH6O60337 910 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 TSPAN1O60635 241 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 TADA2AO75478 443 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 TMEM63AO94886 807 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 GCNT3O95395 438 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 SERPINE1P05121 402 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ZSCAN5DPP0CG00 497 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 TRIM49P0CI25 452 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 TRIM49CP0CI26 452 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 KITP10721 976 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 FGF3P11487 239 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 UNGP13051 313 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 CYP11B1P15538 503 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 POLR2CP19387 275 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ITIH1P19827 911 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 NR4A1P22736 598 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 GLDCP23378 1020 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 CYP3A7P24462 503 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 PRKCHP24723 683 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 SLC16A2P36021 539 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ECE1P42892 770 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 GABRB2P47870 512 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 NOVP48745 357 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 TUFMP49411 452 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 HARS2P49590 506 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 CLK3P49761 638 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 SLC26A2P50443 739 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 HLCSP50747 726 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ZNF143P52747 638 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 IST1P53990 364 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 PHC1P78364 1004 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 BASP1P80723 227 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ECT2LQ008S8 904 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 MS4A2Q01362 244 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 IFITM3Q01628 133 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 RHDQ02161 417 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 BST2Q10589 180 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 CETN1Q12798 172 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 PPIL2Q13356 520 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 CBX2Q14781 532 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 LLGL1Q15334 1064 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 MAPRE1Q15691 268 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 CRY1Q16526 586 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 NRF1Q16656 503 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 LRRC38Q5VT99 294 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ANKRD22Q5VYY1 191 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 GTF2IRD2BQ6EKJ0 949 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 TTC33Q6PID6 262 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 MOXD1Q6UVY6 613 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 TIFABQ6ZNK6 161 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 IDO2Q6ZQW0 420 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 CYP4V2Q6ZWL3 525 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 GTF2IRD2Q86UP8 949 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ZNF227Q86WZ6 799 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 RHPN2Q8IUC4 686 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ARMC8Q8IUR7 673 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ZFPM1Q8IX07 1006 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 KIAA2013Q8IYS2 634 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 HACE1Q8IYU2 909 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 RCOR2Q8IZ40 523 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 MCOLN2Q8IZK6 566 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 DSELQ8IZU8 1212 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 PDIK1LQ8N165 341 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ASCC1Q8N9N2 400 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 SLC4A11Q8NBS3 891 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 FLAD1Q8NFF5 587 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 FNIP1Q8TF40 1166 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 RNF141Q8WVD5 230 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 GJA10Q969M2 543 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ASB9Q96DX5 294 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 MRGPRX3Q96LB0 322 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 SLITRK1Q96PX8 696 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 EYA3Q99504 573 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 SORT1Q99523 831 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 TMEM47Q9BQJ4 181 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 CENPOQ9BU64 300 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 APOL6Q9BWW8 343 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 PRDM14Q9GZV8 571 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 TRIT1Q9H3H1 467 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 ZNF385DQ9H6B1 395 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 RPAP3Q9H6T3 665 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 NEK6Q9HC98 313 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 CCDC177Q9NQR7 707 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 AGPAT3Q9NRZ7 376 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 SMOXQ9NWM0 555 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 IL20Q9NYY1 176 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 NPAP1Q9NZP6 1156 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 KIAA1257Q9ULG3 409 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 TEX264Q9Y6I9 313 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 U3KQE9 123 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 SLIT2O94813 1529 aa4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 RGPD3A6NKT7 1758 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-213ENST00000488131 RGPD4Q7Z3J3 1758 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms