RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 MKS1Q9NXB0 559 aa13.85□□□□□ -0.19
COPS7B-221ENST00000488111 CDH22Q9UJ99 828 aa13.85□□□□□ -0.19
COPS7B-221ENST00000488111 TCRBV7S3A2A0A539 114 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 TCRBV9S1A1TA0A576 114 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 CAPN8A6NHC0 703 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 APOC4-APOC2K7ER74 178 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 SORBS2O94875 1100 aaKnown RBP13.84□□□□□ -0.19
COPS7B-221ENST00000488111 TNFAIP8O95379 198 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 APOC2P02655 101 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 RHOP08100 348 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 SLC2A3P11169 496 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 PTPN2P17706 415 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 ERCC2P18074 760 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 VARSP26640 1264 aaKnown RBP13.84□□□□□ -0.19
COPS7B-221ENST00000488111 SLC10A2Q12908 348 aaPredicted RBP13.84□□□□□ -0.19
COPS7B-221ENST00000488111 KBTBD12Q3ZCT8 623 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 TTC39BQ5VTQ0 682 aaPredicted RBP13.84□□□□□ -0.19
COPS7B-221ENST00000488111 NCBP2-AS2Q69YL0 99 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 KLHL35Q6PF15 583 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 TMC5Q6UXY8 1006 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 GRASPQ7Z6J2 395 aaPredicted RBP13.84□□□□□ -0.19
COPS7B-221ENST00000488111 IGDCC3Q8IVU1 814 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 PDIK1LQ8N165 341 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 TTC13Q8NBP0 860 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 DCUN1D1Q96GG9 259 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 EBF4Q9BQW3 602 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 SIKE1Q9BRV8 207 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 APOL5Q9BWW9 433 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 LMAN2LQ9H0V9 348 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 PRO3102Q9H379 93 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 FAIMQ9NVQ4 179 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 MARCOQ9UEW3 520 aaPredicted RBP13.84□□□□□ -0.19
COPS7B-221ENST00000488111 VANGL2Q9ULK5 521 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 POMPQ9Y244 141 aa13.84□□□□□ -0.19
COPS7B-221ENST00000488111 MAGEB3O15480 346 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 TRMUO75648 421 aaKnown RBP13.83□□□□□ -0.19
COPS7B-221ENST00000488111 PDE5AO76074 875 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 KLHL2O95198 593 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 IGLV3-27P01718 113 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 KITP10721 976 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 KCNA4P22459 653 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 SERPINB6P35237 376 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 RPL22P35268 128 aaKnown RBP13.83□□□□□ -0.19
COPS7B-221ENST00000488111 COPAP53621 1224 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 EPHB1P54762 984 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 GDF10P55107 478 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 MLLT6P55198 1093 aaPredicted RBP13.83□□□□□ -0.19
COPS7B-221ENST00000488111 SMAD3P84022 425 aaKnown RBP13.83□□□□□ -0.19
COPS7B-221ENST00000488111 ZXDBP98169 803 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 DPYSQ14117 519 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 MS4A13Q5J8X5 152 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 RAP1GAP2Q684P5 730 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 PDZD4Q76G19 769 aaPredicted RBP13.83□□□□□ -0.19
COPS7B-221ENST00000488111 TP53INP2Q8IXH6 220 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 ATP6V0D2Q8N8Y2 350 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 SNRNP27Q8WVK2 155 aaKnown RBP13.83□□□□□ -0.19
COPS7B-221ENST00000488111 SMG9Q9H0W8 520 aaKnown RBP13.83□□□□□ -0.19
COPS7B-221ENST00000488111 ZNF576Q9H609 170 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 THEGQ9P2T0 379 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 PADI4Q9UM07 663 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 MYO9BQ13459 2157 aa13.83□□□□□ -0.19
COPS7B-221ENST00000488111 REV3LO60673 3130 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 TRIM49D1C9J1S8 452 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 E9PBE3 544 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 C1QAP02745 245 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 KLKB1P03952 638 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 IDO1P14902 403 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 RGS19P49795 217 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 EIF3EP60228 445 aaKnown RBP13.83□□□□□ -0.2
COPS7B-221ENST00000488111 COG7P83436 770 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 MYBPC1Q00872 1141 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 DENND1CQ8IV53 801 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 NUDCD3Q8IVD9 361 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 BBS5Q8N3I7 341 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 CEP70Q8NHQ1 597 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 ZNF707Q96C28 371 aaPredicted RBP13.83□□□□□ -0.2
COPS7B-221ENST00000488111 MRPL38Q96DV4 380 aaKnown RBP13.83□□□□□ -0.2
COPS7B-221ENST00000488111 BTN2A3PQ96KV6 586 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 KLF16Q9BXK1 252 aaPredicted RBP13.83□□□□□ -0.2
COPS7B-221ENST00000488111 SLC46A2Q9BY10 475 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 PRKD2Q9BZL6 878 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 C20orf27Q9GZN8 174 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 STN1Q9H668 368 aaKnown RBP13.83□□□□□ -0.2
COPS7B-221ENST00000488111 MPP6Q9NZW5 540 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 C6orf203Q9P0P8 240 aaPredicted RBP13.83□□□□□ -0.2
COPS7B-221ENST00000488111 RCOR3Q9P2K3 495 aaPredicted RBP13.83□□□□□ -0.2
COPS7B-221ENST00000488111 PAIP2BQ9ULR5 123 aaKnown RBP13.83□□□□□ -0.2
COPS7B-221ENST00000488111 CEPT1Q9Y6K0 416 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 DOCK6Q96HP0 2047 aa13.83□□□□□ -0.2
COPS7B-221ENST00000488111 ZNF487B1APH4 448 aa13.82□□□□□ -0.2
COPS7B-221ENST00000488111 E9PAM4 449 aa13.82□□□□□ -0.2
COPS7B-221ENST00000488111 SPAG6O75602 509 aa13.82□□□□□ -0.2
COPS7B-221ENST00000488111 STC2O76061 302 aa13.82□□□□□ -0.2
COPS7B-221ENST00000488111 CKMP06732 381 aa13.82□□□□□ -0.2
COPS7B-221ENST00000488111 ELK3P41970 407 aa13.82□□□□□ -0.2
COPS7B-221ENST00000488111 RING1Q06587 406 aa13.82□□□□□ -0.2
COPS7B-221ENST00000488111 TEAD2Q15562 447 aa13.82□□□□□ -0.2
COPS7B-221ENST00000488111 NADSYN1Q6IA69 706 aa13.82□□□□□ -0.2
COPS7B-221ENST00000488111 SLC26A11Q86WA9 606 aa13.82□□□□□ -0.2
COPS7B-221ENST00000488111 SMYD1Q8NB12 490 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms