RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 DAB2IPQ5VWQ8 1189 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 CDC73Q6P1J9 531 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 FBXO46Q6PJ61 603 aaPredicted RBP2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 CYP20A1Q6UW02 462 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 QSOX2Q6ZRP7 698 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 COLCA1Q6ZS62 124 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 CPLX4Q7Z7G2 160 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 TMC8Q8IU68 726 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 DENND6AQ8IWF6 608 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 SLC35F3Q8IY50 421 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 RBFAQ8N0V3 343 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 PARP16Q8N5Y8 322 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 C7orf57Q8NEG2 295 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 GJC3Q8NFK1 279 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 GABPB2Q8TAK5 448 aaPredicted RBP2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 CREB3L4Q8TEY5 395 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 RNF183Q96D59 192 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 CAMK1GQ96NX5 476 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 BBS4Q96RK4 519 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 MXRA8Q9BRK3 442 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 ISCUQ9H1K1 167 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 POLR1BQ9H9Y6 1135 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 FZD3Q9NPG1 666 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 KRT84Q9NSB2 600 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 NCKIPSDQ9NZQ3 722 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 NDRG3Q9UGV2 375 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 A4GNTQ9UNA3 340 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 INSL5Q9Y5Q6 135 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 A3GALT2U3KPV4 340 aa2.99□□□□□ -1.93
R3HDM1-219ENST00000488035 TYW5A2RUC4 315 aaKnown RBP2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 B4DGG1 531 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 J3KR12 359 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 TAF4O00268 1085 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 DOK2O60496 412 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ZC3H11AO75152 810 aaKnown RBP eCLIP2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 RGS11O94810 467 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 TOMM40O96008 361 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 TFP02787 698 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 KLKB1P03952 638 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 LCATP04180 440 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 SPARCP09486 303 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 MYZAPP0CAP1 466 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ENO3P13929 434 aaPredicted RBP2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ZNF8P17098 575 aaPredicted RBP2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 PTPN2P17706 415 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 GNLYP22749 145 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 SHMT1P34896 483 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 PIGAP37287 484 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 COMPP49747 757 aaPredicted RBP2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 GNAQP50148 359 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 EIF3BP55884 814 aaKnown RBP2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 MYBPC2Q14324 1141 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 GPR18Q14330 331 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 FGFBP1Q14512 234 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 SGO1Q5FBB7 561 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 DCAF12L2Q5VW00 463 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 LCTLQ6UWM7 567 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 Q6ZTK2 550 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ZNF367Q7RTV3 350 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 TRAPPC11Q7Z392 1133 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 CAMK1DQ8IU85 385 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 TEX45Q8NA69 505 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 TMEM116Q8NCL8 245 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ZMIZ2Q8NF64 920 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 MPLKIPQ8TAP9 179 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ETNPPLQ8TBG4 499 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ARRDC2Q8TBH0 407 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ASB5Q8WWX0 329 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 PSPC1Q8WXF1 523 aaKnown RBP2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 SNAPC3Q92966 411 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ERGIC1Q969X5 290 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 INTS12Q96CB8 462 aaKnown RBP2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 SAAL1Q96ER3 474 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ZC3HAV1LQ96H79 300 aaKnown RBP2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ZNF333Q96JL9 665 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 NLRP4Q96MN2 994 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 FAM234AQ9H0X4 552 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 CDT1Q9H211 546 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 TASP1Q9H6P5 420 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 CLK4Q9HAZ1 481 aaKnown RBP2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 SLC6A13Q9NSD5 602 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 PLK2Q9NYY3 685 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ABI3Q9P2A4 366 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ADAM18Q9Y3Q7 739 aa2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 LSM4Q9Y4Z0 139 aaKnown RBP2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 TDRD9Q8NDG6 1382 aaKnown RBP2.98□□□□□ -1.93
R3HDM1-219ENST00000488035 ITIH6Q6UXX5 1313 aa2.97□□□□□ -1.93
R3HDM1-219ENST00000488035 A0A1B0GVT2 93 aa2.97□□□□□ -1.93
R3HDM1-219ENST00000488035 GAGE12JA6NER3 117 aa2.97□□□□□ -1.93
R3HDM1-219ENST00000488035 C4orf47A7E2U8 309 aa2.97□□□□□ -1.93
R3HDM1-219ENST00000488035 F5H0A9 414 aaPredicted RBP2.97□□□□□ -1.93
R3HDM1-219ENST00000488035 TNFRSF13BO14836 293 aaPredicted RBP2.97□□□□□ -1.93
R3HDM1-219ENST00000488035 TIMM23O14925 209 aa2.97□□□□□ -1.93
R3HDM1-219ENST00000488035 PAGE4O60829 102 aa2.97□□□□□ -1.93
R3HDM1-219ENST00000488035 PTP4A3O75365 173 aa2.97□□□□□ -1.93
R3HDM1-219ENST00000488035 RNASEH2AO75792 299 aaKnown RBP2.97□□□□□ -1.93
R3HDM1-219ENST00000488035 SEC14L2O76054 403 aa2.97□□□□□ -1.93
R3HDM1-219ENST00000488035 DDX58O95786 925 aaKnown RBP2.97□□□□□ -1.93
R3HDM1-219ENST00000488035 MMP3P08254 477 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms