RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 TRAFD1O14545 582 aaPredicted RBP11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 RIOK3O14730 519 aaKnown RBP11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CASC3O15234 703 aaKnown RBP11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 OPA1O60313 960 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 GCATO75600 419 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PALMO75781 387 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 GP1BAP07359 652 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ALPPL2P10696 532 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 JUPP14923 745 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CR2P20023 1033 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SERPINA4P29622 427 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 LIG3P49916 1009 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 THOP1P52888 689 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 YPEL5P62699 121 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ZBED6P86452 979 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SLC10A7Q0GE19 358 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 RFTN1Q14699 578 aaPredicted RBP11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 DEFB133Q30KQ1 61 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PRRT3Q5FWE3 981 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TMCO4Q5TGY1 634 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 GUSBP11Q6P575 273 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SRLQ86TD4 932 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CPNE8Q86YQ8 564 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SLC35F3Q8IY50 421 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CACTIN-AS1Q8N1I8 211 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PGBD5Q8N414 524 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TEKT4Q8WW24 435 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PDXPQ96GD0 296 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CRELD1Q96HD1 420 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TBATAQ96M53 351 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 DUSP23Q9BVJ7 150 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 BOCQ9BWV1 1114 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 C1QTNF7Q9BXJ2 289 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 NRSN2Q9GZP1 204 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CLPBQ9H078 707 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ZWILCHQ9H900 591 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 USP29Q9HBJ7 922 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PCDH18Q9HCL0 1135 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 IPO11Q9UI26 975 aaKnown RBP11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ANAPC7Q9UJX3 599 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CAPN11Q9UMQ6 739 aa11.3□□□□□ -0.6
RAB11FIP3-210ENST00000487899 NEMP2A6NFY4 417 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 LMO7DNF2Z398 122 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 H3BRJ5 948 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TOR1BO14657 336 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 MFSD11O43934 449 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 BRINP1O60477 761 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SERPING1P05155 500 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CYP1A2P05177 515 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 RARAP10276 462 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 EIF4A3P38919 411 aaKnown RBP11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 UBASH3AP57075 661 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 AP1S1P61966 158 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 NFATC4Q14934 902 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 LRRC14Q15048 493 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CDKN3Q16667 212 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ALG11Q2TAA5 492 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ZSCAN23Q3MJ62 389 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 HS1BP3Q53T59 392 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TMCO3Q6UWJ1 677 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PELI3Q8N2H9 469 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PLA2G15Q8NCC3 412 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 SNIP1Q8TAD8 396 aaKnown RBP11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 FAM71BQ8TC56 605 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 IFI44Q8TCB0 444 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 LMX1AQ8TE12 382 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 HSPH1Q92598 858 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 MGME1Q9BQP7 344 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 NUP85Q9BW27 656 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 IFNKQ9P0W0 207 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 BZW2Q9Y6E2 419 aaKnown RBP11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 BOD1L1Q8NFC6 3051 aa11.29□□□□□ -0.6
RAB11FIP3-210ENST00000487899 UNC13CQ8NB66 2214 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TTC24A2A3L6 582 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 EME2A4GXA9 379 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TPP1O14773 563 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 DAPK3O43293 454 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 MAFKO60675 156 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 MT-CO3P00414 261 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PCCBP05166 539 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CD48P09326 243 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TSHRP16473 764 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 TGM2P21980 687 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 XPAP23025 273 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 AMPD1P23109 780 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ARL4AP40617 200 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ARSEP51690 589 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PDX1P52945 283 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 E2F1Q01094 437 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 NSUN2Q08J23 767 aaKnown RBP eCLIP11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 MTM1Q13496 603 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 C1orf61Q13536 156 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PTK2BQ14289 1009 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PIGHQ14442 188 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 LBRQ14739 615 aaKnown RBP11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 PERM1Q5SV97 790 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 C6orf132Q5T0Z8 1188 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 CFAP58Q5T655 872 aa11.28□□□□□ -0.6
RAB11FIP3-210ENST00000487899 ERAP2Q6P179 960 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms