RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 SMARCAL1Q9NZC9 954 aa2.21□□□□□ -2.06
USP9X-208ENST00000487625 ZNF224Q9NZL3 707 aa2.21□□□□□ -2.06
USP9X-208ENST00000487625 SLC9A2Q9UBY0 812 aa2.21□□□□□ -2.06
USP9X-208ENST00000487625 PNMA2Q9UL42 364 aa2.21□□□□□ -2.06
USP9X-208ENST00000487625 FAM172BPA6NC97 362 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 H0Y3Z8 333 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 HSPA12AO43301 675 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 WDHD1O75717 1129 aaPredicted RBP2.2□□□□□ -2.06
USP9X-208ENST00000487625 SLC22A3O75751 556 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 METTL18O95568 372 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 ADAP00813 363 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 IL1AP01583 271 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 CD53P19397 219 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 KCNA5P22460 613 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 TTKP33981 857 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 PNPLA4P41247 253 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 CENPAP49450 140 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 FUT6P51993 359 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 ARHGAP8P85298 464 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 FOXD4Q12950 439 aaPredicted RBP2.2□□□□□ -2.06
USP9X-208ENST00000487625 PICALMQ13492 652 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 THOC5Q13769 683 aaKnown RBP2.2□□□□□ -2.06
USP9X-208ENST00000487625 PLEKHO1Q53GL0 409 aaPredicted RBP2.2□□□□□ -2.06
USP9X-208ENST00000487625 DCAF6Q58WW2 860 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 SYCP2LQ5T4T6 812 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 KLHL24Q6TFL4 600 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 NEK10Q6ZWH5 1172 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 SATL1Q86VE3 508 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 CCDC117Q8IWD4 279 aaPredicted RBP2.2□□□□□ -2.06
USP9X-208ENST00000487625 FAM186BQ8IYM0 893 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 SPICE1Q8N0Z3 855 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 FSIP1Q8NA03 581 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 SPATA22Q8NHS9 363 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 OTUD7AQ8TE49 926 aaPredicted RBP2.2□□□□□ -2.06
USP9X-208ENST00000487625 USP13Q92995 863 aaPredicted RBP2.2□□□□□ -2.06
USP9X-208ENST00000487625 MTBPQ96DY7 904 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 FEM1CQ96JP0 617 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 LRFN5Q96NI6 719 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 ARPC5LQ9BPX5 153 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 CTDSP1Q9GZU7 261 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 ARFGAP3Q9NP61 516 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 ZFP57Q9NU63 452 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 SLCO3A1Q9UIG8 710 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 PAM16Q9Y3D7 125 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 ZNF711Q9Y462 761 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 CLDN16Q9Y5I7 305 aa2.2□□□□□ -2.06
USP9X-208ENST00000487625 ZNF587BE7ETH6 402 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 HBP1O60381 514 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 SKAP2O75563 359 aaPredicted RBP2.19□□□□□ -2.06
USP9X-208ENST00000487625 GAGE7O76087 117 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 SERPINC1P01008 464 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 HSP90AA1P07900 732 aaKnown RBP2.19□□□□□ -2.06
USP9X-208ENST00000487625 GAGE12FP0CL80 117 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 GAGE12GP0CL81 117 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 GAGE12IP0CL82 117 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 MARK3P27448 753 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 TIMP3P35625 211 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 PIGAP37287 484 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 ARSFP54793 590 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 BTKQ06187 659 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 ZNF155Q12901 538 aaPredicted RBP2.19□□□□□ -2.06
USP9X-208ENST00000487625 GAGE1Q13065 139 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 GAGE4Q13068 117 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 SMAD1Q15797 465 aaKnown RBP2.19□□□□□ -2.06
USP9X-208ENST00000487625 PAPPA-AS1Q5QFB9 102 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 SH2D4BQ5SQS7 431 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 NAPEPLDQ6IQ20 393 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 GJB7Q6PEY0 223 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 RINLQ6ZS11 566 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 TOGARAM2Q6ZUX3 1019 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 SFTPA2Q8IWL1 248 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 LINS1Q8NG48 757 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 LNX1Q8TBB1 728 aaPredicted RBP2.19□□□□□ -2.06
USP9X-208ENST00000487625 NCSTNQ92542 709 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 FIG4Q92562 907 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 RNF183Q96D59 192 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 KTI12Q96EK9 354 aaPredicted RBP2.19□□□□□ -2.06
USP9X-208ENST00000487625 C3orf30Q96M34 536 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 RMDN3Q96TC7 470 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 MPHOSPH6Q99547 160 aaKnown RBP2.19□□□□□ -2.06
USP9X-208ENST00000487625 NAP1L4Q99733 375 aaKnown RBP2.19□□□□□ -2.06
USP9X-208ENST00000487625 NLRC4Q9NPP4 1024 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 G6PC2Q9NQR9 355 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 ANKRD10Q9NXR5 420 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 SIX4Q9UIU6 781 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 FBXO9Q9UK97 447 aaPredicted RBP2.19□□□□□ -2.06
USP9X-208ENST00000487625 KCNS2Q9ULS6 477 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 SNX9Q9Y5X1 595 aa2.19□□□□□ -2.06
USP9X-208ENST00000487625 A0A0G2JPF8 293 aa2.18□□□□□ -2.06
USP9X-208ENST00000487625 HNRNPCL3B7ZW38 293 aa2.18□□□□□ -2.06
USP9X-208ENST00000487625 E7EVH7 732 aa2.18□□□□□ -2.06
USP9X-208ENST00000487625 MID1O15344 667 aa2.18□□□□□ -2.06
USP9X-208ENST00000487625 FGF17O60258 216 aa2.18□□□□□ -2.06
USP9X-208ENST00000487625 HNRNPCL1O60812 293 aaKnown RBP2.18□□□□□ -2.06
USP9X-208ENST00000487625 KRT38O76015 456 aa2.18□□□□□ -2.06
USP9X-208ENST00000487625 DHRS4L1P0CG22 281 aa2.18□□□□□ -2.06
USP9X-208ENST00000487625 HNRNPCL4P0DMR1 293 aa2.18□□□□□ -2.06
USP9X-208ENST00000487625 TFPIP10646 304 aa2.18□□□□□ -2.06
USP9X-208ENST00000487625 SP100P23497 879 aaPredicted RBP2.18□□□□□ -2.06
USP9X-208ENST00000487625 PRKAA2P54646 552 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms