RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PARP15Q460N3 678 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 SIRPB2Q5JXA9 342 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 TCHHL1Q5QJ38 904 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 PPM1LQ5SGD2 360 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 ACBD5Q5T8D3 534 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 HECTD2Q5U5R9 776 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 NXNQ6DKJ4 435 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 KLC3Q6P597 504 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 PGBD5Q8N414 524 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 UCMAQ8WVF2 138 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 CATSPER2Q96P56 530 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 ECSITQ9BQ95 431 aa18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 UXTQ9UBK9 157 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 G3BP2Q9UN86 482 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-207ENST00000486828 VWA8A3KMH1 1905 aa18.09■□□□□ 0.49
PDLIM7-207ENST00000486828 LOC285095A0A1B0GVY8 99 aa18.09■□□□□ 0.49
PDLIM7-207ENST00000486828 ATXN1LP0C7T5 689 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-207ENST00000486828 POLD3Q15054 466 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-207ENST00000486828 SH2D4BQ5SQS7 431 aa18.09■□□□□ 0.49
PDLIM7-207ENST00000486828 C10orf120Q5SQS8 335 aa18.09■□□□□ 0.49
PDLIM7-207ENST00000486828 FAM171A1Q5VUB5 890 aa18.09■□□□□ 0.49
PDLIM7-207ENST00000486828 TMEM198Q66K66 360 aa18.09■□□□□ 0.49
PDLIM7-207ENST00000486828 PTAR1Q7Z6K3 402 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-207ENST00000486828 EFCAB3Q8N7B9 438 aa18.09■□□□□ 0.49
PDLIM7-207ENST00000486828 KYQ8NBH2 561 aa18.09■□□□□ 0.49
PDLIM7-207ENST00000486828 RPRD1AQ96P16 312 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-207ENST00000486828 ZBTB26Q9HCK0 441 aa18.09■□□□□ 0.49
PDLIM7-207ENST00000486828 SLC12A8A0AV02 714 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 TTC24A2A3L6 582 aaPredicted RBP18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 NEMP2A6NFY4 417 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 SOAT2O75908 522 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 RBP1P09455 135 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 SATB1Q01826 763 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 TAF10Q12962 218 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 CDC16Q13042 620 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 SERINC3Q13530 473 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 GSTA3Q16772 222 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 RASIP1Q5U651 963 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 TMEM154Q6P9G4 183 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 RNF111Q6ZNA4 994 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 DSELQ8IZU8 1212 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 SLAIN1Q8ND83 568 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 UBXN10Q96LJ8 280 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 GLT1D1Q96MS3 346 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 SERPINI1Q99574 410 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 TMEM161AQ9NX61 479 aa18.08■□□□□ 0.49
PDLIM7-207ENST00000486828 A8MT66 165 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 TMEM233B4DJY2 109 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 SDHDO14521 159 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 IPO13O94829 963 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 HMBSP08397 361 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 CCDC166P0CW27 439 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 COL6A1P12109 1028 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 MAPKAPK2P49137 400 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 ARSDP51689 593 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 YBEYP58557 167 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 PRAMEP78395 509 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 RING1Q06587 406 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 ACAP2Q15057 778 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 CIR1Q86X95 450 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 RNF135Q8IUD6 432 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 HDAC10Q969S8 669 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 SPDL1Q96EA4 605 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 FAR2Q96K12 515 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 GTSE1Q9NYZ3 720 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 STK39Q9UEW8 545 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 VPS28Q9UK41 221 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 VWA7Q9Y334 891 aa18.08■□□□□ 0.48
PDLIM7-207ENST00000486828 DPPA5A6NC42 116 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 LDB2O43679 373 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 WISP3O95389 354 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 S1PR4O95977 384 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 KCNA5P22460 613 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 ETFBP38117 255 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 PBX3P40426 434 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 ARPP19P56211 112 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 SULT2A1Q06520 285 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 KBTBD6Q86V97 674 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 OR6P1Q8NGX9 317 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 SPPL2BQ8TCT7 592 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 RCN3Q96D15 328 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 SPATA17Q96L03 361 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 GPR62Q9BZJ7 368 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 POLR1EQ9GZS1 481 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 VCXQ9H320 206 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 EML4Q9HC35 981 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 SLC27A5Q9Y2P5 690 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 COPG1Q9Y678 874 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 DNAH12Q6ZR08 3092 aa18.07■□□□□ 0.48
PDLIM7-207ENST00000486828 MTMR11A4FU01 709 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 MOXD2PA6NHM9 499 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 KIF1CO43896 1103 aaKnown RBP18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 LINGO3P0C6S8 592 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 HNRNPLP14866 589 aaKnown RBP eCLIP18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 FGFR3P22607 806 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 OR1E1P30953 314 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 SLC26A3P40879 764 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 ACVR1Q04771 509 aa18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 BNC2Q6ZN30 1099 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-207ENST00000486828 SLC22A9Q8IVM8 553 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms