RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 SHMT2P34897 504 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 CA8P35219 290 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 ADAM17P78536 824 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 IFRD2Q12894 506 aaPredicted RBP10.71□□□□□ -0.69
CCDC171-208ENST00000486641 TRIM32Q13049 653 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 SLC12A1Q13621 1099 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 SURF1Q15526 300 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 CARTPTQ16568 116 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 ZIK1Q3SY52 487 aaPredicted RBP10.71□□□□□ -0.69
CCDC171-208ENST00000486641 CERCAMQ5T4B2 595 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 STYK1Q6J9G0 422 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 PMF1Q6P1K2 205 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 PLEKHG7Q6ZR37 379 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 RPS27LQ71UM5 84 aaKnown RBP10.71□□□□□ -0.69
CCDC171-208ENST00000486641 MMAAQ8IVH4 418 aaKnown RBP10.71□□□□□ -0.69
CCDC171-208ENST00000486641 FUNDC1Q8IVP5 155 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 NAT16Q8N8M0 369 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 ATP6V0D2Q8N8Y2 350 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 CAPSLQ8WWF8 208 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 GPRASP2Q96D09 838 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 GPR22Q99680 433 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 RMND5AQ9H871 391 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 MEAF6Q9HAF1 191 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 LRRC4Q9HBW1 653 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 FAM49BQ9NUQ9 324 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 MAP3K20Q9NYL2 800 aaKnown RBP10.71□□□□□ -0.69
CCDC171-208ENST00000486641 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.71□□□□□ -0.69
CCDC171-208ENST00000486641 WARS2Q9UGM6 360 aaKnown RBP10.71□□□□□ -0.69
CCDC171-208ENST00000486641 TSPAN16Q9UKR8 245 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 VANGL2Q9ULK5 521 aa10.71□□□□□ -0.69
CCDC171-208ENST00000486641 TTC24A2A3L6 582 aaPredicted RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 NEMP2A6NFY4 417 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 AXIN1O15169 862 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 MAFGO15525 162 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 MFSD11O43934 449 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 RAD17O75943 681 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 MT-CO1P00395 513 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 YWHAQP27348 245 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 HTR1BP28222 390 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 CCND2P30279 289 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 NR4A2P43354 598 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 ARPC4P59998 168 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 SLC6A3Q01959 620 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 CLCQ05315 142 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 DGKZQ13574 1117 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 POLD3Q15054 466 aaPredicted RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 FAM98CQ17RN3 349 aaKnown RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 STRIP1Q5VSL9 837 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 PID1Q7Z2X4 250 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 TFAP2DQ7Z6R9 452 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 LINC00523Q86TU6 105 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 SAPCD2Q86UD0 394 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 SLCO6A1Q86UG4 719 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 ITIH5Q86UX2 942 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 SLC22A16Q86VW1 577 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 SLC41A1Q8IVJ1 513 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 SPARTQ8N0X7 666 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 CCDC185Q8N715 623 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 C12orf29Q8N999 325 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 TXNDC5Q8NBS9 432 aaKnown RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 CCNYQ8ND76 341 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 GABPB2Q8TAK5 448 aaPredicted RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 GPR78Q96P69 363 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 IL12RB2Q99665 862 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 B3GNT5Q9BYG0 378 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 TRIM15Q9C019 465 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 HOXD1Q9GZZ0 328 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 SNX25Q9H3E2 840 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 PARVBQ9HBI1 364 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 CHRAC1Q9NRG0 131 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 KLRG2A4D1S0 409 aaPredicted RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 EIF3FO00303 357 aaPredicted RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 AURKAO14965 403 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 UGT2B11O75310 529 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 CHEK2O96017 543 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 MTHFD1P11586 935 aaKnown RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 GFAPP14136 432 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 GSTM2P28161 218 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 RFC2P35250 354 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 BMPR1AP36894 532 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 PIGFQ07326 219 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 BAATQ14032 418 aaPredicted RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 CBX2Q14781 532 aaPredicted RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 CYP51A1Q16850 503 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 ATAD3BQ5T9A4 648 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 LCN8Q6JVE9 175 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 KIAA0408Q6ZU52 694 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 R3HCC1LQ7Z5L2 792 aaKnown RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 ZC3HC1Q86WB0 502 aaKnown RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 CDR2LQ86X02 465 aaPredicted RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 NT5DC4Q86YG4 428 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 CLIP4Q8N3C7 705 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 DNAAF3Q8N9W5 541 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 ROPN1LQ96C74 230 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 VMP1Q96GC9 406 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 MRPL4Q9BYD3 311 aaKnown RBP10.7□□□□□ -0.7
CCDC171-208ENST00000486641 TRIM8Q9BZR9 551 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 ADNPQ9H2P0 1102 aa10.7□□□□□ -0.7
CCDC171-208ENST00000486641 POMKQ9H5K3 350 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms