RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 CFAP69A5D8W1 941 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 PRR23AA6NEV1 266 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 C1QTNF3-AMACRE9PGA6 284 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 PLK4O00444 970 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 KPNA3O00505 521 aaPredicted RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 NPC1O15118 1278 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 MID1O15344 667 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 MTSS1O43312 755 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 LAMTOR5O43504 91 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 ZNF500O60304 480 aaPredicted RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 PMPCBO75439 489 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 LEFTY1O75610 366 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 PEX11BO96011 259 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 MT-CYBP00156 380 aaPredicted RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 KRT14P02533 472 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 DNTTP04053 509 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 PRKCGP05129 697 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 UGT2B4P06133 528 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 ACADMP11310 421 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 NFKB1P19838 968 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 XPAP23025 273 aaPredicted RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 PSMB4P28070 264 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 AVPR2P30518 371 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 CHRNA3P32297 505 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 COILP38432 576 aaPredicted RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 CD86P42081 329 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 CXCL12P48061 93 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 LMAN1P49257 510 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 METAP1P53582 386 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 IFI35P80217 286 aaPredicted RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 BASP1P80723 227 aaKnown RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 SEMG2Q02383 582 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 CSTF1Q05048 431 aaKnown RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 BCL2L1Q07817 233 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 NIPAL4Q0D2K0 466 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 WASHC5Q12768 1159 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 HNRNPDQ14103 355 aaKnown RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 RFTN1Q14699 578 aaPredicted RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 PPP1R7Q15435 360 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 OASLQ15646 514 aaKnown RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 CRY1Q16526 586 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 MYLK3Q32MK0 819 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 HNRNPA1L2Q32P51 320 aaKnown RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 TEX44Q53QW1 395 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 LRRC73Q5JTD7 316 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 ANKRD20A2Q5SQ80 823 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 C9orf64Q5T6V5 341 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 ANKRD20A1Q5TYW2 823 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 ANKRD20A3Q5VUR7 823 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 TTC27Q6P3X3 843 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 ARHGEF18Q6ZSZ5 1173 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 SRLQ86TD4 932 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 FAM124AQ86V42 546 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 TMPRSS6Q8IU80 811 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 CAMK1DQ8IU85 385 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 SYNPOQ8N3V7 929 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 SPEM1Q8N4L4 309 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 CNTD1Q8N815 330 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 GLIS1Q8NBF1 620 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 OR2AP1Q8NGE2 309 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 OR2A12Q8NGT7 310 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 OR2T3Q8NH03 318 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 SPATA22Q8NHS9 363 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 SLC35B2Q8TB61 432 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 PIP4K2CQ8TBX8 421 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 FRS2Q8WU20 508 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 CASKIN2Q8WXE0 1202 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 MAML1Q92585 1016 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 PRCCQ92733 491 aaPredicted RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 KLHL32Q96NJ5 620 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 ZNF599Q96NL3 588 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 RBM15Q96T37 977 aaKnown RBP eCLIP5.69□□□□□ -1.5
COPS3-208ENST00000486032 IL12RB2Q99665 862 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 GABRG3Q99928 467 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 HINFPQ9BQA5 517 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 HEPHQ9BQS7 1158 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 CARD6Q9BX69 1037 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 FRMD8P1Q9BZ68 369 aaPredicted RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 OSBPL6Q9BZF3 934 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 TRIM31Q9BZY9 425 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 CEP44Q9C0F1 390 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 POLR1EQ9GZS1 481 aaKnown RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 BRD8Q9H0E9 1235 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 CHRDQ9H2X0 955 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 NOD2Q9HC29 1040 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 GLOD4Q9HC38 313 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 DYRK4Q9NR20 520 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 HOMER3Q9NSC5 361 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 HAUS2Q9NVX0 235 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 RNF14Q9UBS8 474 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 IL36AQ9UHA7 158 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 CDC23Q9UJX2 597 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 TTC7AQ9ULT0 858 aaPredicted RBP5.69□□□□□ -1.5
COPS3-208ENST00000486032 INVSQ9Y283 1065 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 PCDHB9Q9Y5E1 797 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 MRFAP1Q9Y605 127 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 CHD5Q8TDI0 1954 aa5.69□□□□□ -1.5
COPS3-208ENST00000486032 A0A1W2PNR3 127 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 A0A1W2PQF6 199 aa5.68□□□□□ -1.5
COPS3-208ENST00000486032 CTAGE15A4D2H0 777 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms