RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 AFPP02771 609 aaKnown RBP4.24□□□□□ -1.73
SMC4-215ENST00000484799 UMODP07911 640 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 CHRM4P08173 479 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 CETPP11597 493 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 SLC2A4P14672 509 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 DDIT3P35638 169 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 TNFAIP1Q13829 316 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 NAA25Q14CX7 972 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 SYT16Q17RD7 645 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 CEP85LQ5SZL2 805 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 FBXL22Q6P050 247 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 KRBA2Q6ZNG9 492 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 MMS22LQ6ZRQ5 1243 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 CPXM2Q8N436 756 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 CREB3L4Q8TEY5 395 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 STAMQ92783 540 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 FBXO17Q96EF6 278 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 ZNF570Q96NI8 536 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 KXD1Q9BQD3 176 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 CYSLTR2Q9NS75 346 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 BABAM1Q9NWV8 329 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 PCDHGB3Q9Y5G1 929 aa4.24□□□□□ -1.73
SMC4-215ENST00000484799 PRR23AA6NEV1 266 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 TULP2O00295 520 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 PEX12O00623 359 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 CEP104O60308 925 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 ZIC3O60481 467 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 CLDN14O95500 239 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 PLGP00747 810 aaPredicted RBP4.23□□□□□ -1.73
SMC4-215ENST00000484799 CGAP01215 116 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 TK1P04183 234 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 CD58P19256 250 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 TBL3Q12788 808 aaKnown RBP4.23□□□□□ -1.73
SMC4-215ENST00000484799 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 JMJD6Q6NYC1 403 aaPredicted RBP4.23□□□□□ -1.73
SMC4-215ENST00000484799 TMED8Q6PL24 325 aaPredicted RBP4.23□□□□□ -1.73
SMC4-215ENST00000484799 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.23□□□□□ -1.73
SMC4-215ENST00000484799 TBC1D26Q86UD7 250 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 FTSJ3Q8IY81 847 aaKnown RBP4.23□□□□□ -1.73
SMC4-215ENST00000484799 ARRDC2Q8TBH0 407 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 LRRC8CQ8TDW0 803 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 TMEM170AQ8WVE7 144 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 WBP2Q969T9 261 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 PKP4Q99569 1192 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 SLC32A1Q9H598 525 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 UBTD1Q9HAC8 227 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 SLCO3A1Q9UIG8 710 aa4.23□□□□□ -1.73
SMC4-215ENST00000484799 SCN5AQ14524 2016 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 A0A0G2JPF8 293 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 C17orf100A8MU93 164 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 HNRNPCL3B7ZW38 293 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 IRAK2O43187 625 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 HSPA12AO43301 675 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 DHX16O60231 1041 aaKnown RBP4.22□□□□□ -1.73
SMC4-215ENST00000484799 FGF17O60258 216 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 HNRNPCL1O60812 293 aaKnown RBP4.22□□□□□ -1.73
SMC4-215ENST00000484799 HNRNPCL4P0DMR1 293 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 PTPN2P17706 415 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 GPTP24298 496 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 PIGAP37287 484 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 PAPOLAP51003 745 aaKnown RBP4.22□□□□□ -1.73
SMC4-215ENST00000484799 ARL4CP56559 192 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 VEPH1Q14D04 833 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 MAPRE1Q15691 268 aaKnown RBP4.22□□□□□ -1.73
SMC4-215ENST00000484799 NAPEPLDQ6IQ20 393 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 CCDC129Q6ZRS4 1044 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 NEXN-AS1Q8NBZ9 246 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 OR13A1Q8NGR1 328 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 SORCS1Q8WY21 1168 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 WBP1Q96G27 269 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 CSF3RQ99062 836 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 IL1RAPL1Q9NZN1 696 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 PNMA2Q9UL42 364 aa4.22□□□□□ -1.73
SMC4-215ENST00000484799 C17orf113A0A1B0GUU1 675 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 FAM172BPA6NC97 362 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 J3KR12 359 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 EBAG9O00559 213 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 XPNPEP2O43895 674 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 FAM155BO75949 473 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 KDM4BO94953 1096 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 TTKP33981 857 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 ZNF132P52740 706 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 ARL16Q0P5N6 197 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 DMP1Q13316 513 aaPredicted RBP4.21□□□□□ -1.74
SMC4-215ENST00000484799 POSTNQ15063 836 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 AMZ1Q400G9 498 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 MOGAT3Q86VF5 341 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 PARP16Q8N5Y8 322 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 METTL27Q8N6F8 245 aaPredicted RBP4.21□□□□□ -1.74
SMC4-215ENST00000484799 GJC3Q8NFK1 279 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 TMEM255BQ8WV15 326 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 FIG4Q92562 907 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 TANKQ92844 425 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 TBC1D20Q96BZ9 403 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 DUX3Q96PT4 197 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 SIN3AQ96ST3 1273 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 TWSG1Q9GZX9 223 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 STN1Q9H668 368 aaKnown RBP4.21□□□□□ -1.74
SMC4-215ENST00000484799 SDF2L1Q9HCN8 221 aa4.21□□□□□ -1.74
SMC4-215ENST00000484799 SMYD2Q9NRG4 433 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms