RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PCDHGA8Q9Y5G5 932 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 ENTPD2Q9Y5L3 495 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 NBEAQ8NFP9 2946 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 LRP4O75096 1905 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 TEX33O43247 280 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 RASGRP1O95267 797 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 MMP12P39900 470 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 HK3P52790 923 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 SKOR1P84550 965 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 IL10RBQ08334 325 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 C1orf61Q13536 156 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 CA9Q16790 459 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 BROXQ5VW32 411 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 ARHGAP12Q8IWW6 846 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 AOPEPQ8N6M6 819 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 SCG3Q8WXD2 468 aaKnown RBP11.55□□□□□ -0.56
SCFD1-206ENST00000484733 ECHDC3Q96DC8 303 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 PRR11Q96HE9 360 aaPredicted RBP11.55□□□□□ -0.56
SCFD1-206ENST00000484733 KCTD15Q96SI1 283 aaPredicted RBP11.55□□□□□ -0.56
SCFD1-206ENST00000484733 LGMNQ99538 433 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 SNRNP25Q9BV90 132 aaKnown RBP11.55□□□□□ -0.56
SCFD1-206ENST00000484733 ATP13A3Q9H7F0 1226 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 GPATCH2LQ9NWQ4 482 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 SHROOM3Q8TF72 1996 aa11.55□□□□□ -0.56
SCFD1-206ENST00000484733 NTN3O00634 580 aaPredicted RBP11.54□□□□□ -0.56
SCFD1-206ENST00000484733 HTR1BP28222 390 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 SERPINA4P29622 427 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 PRKCIP41743 596 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 LIG3P49916 1009 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 TYRO3Q06418 890 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 ALG11Q2TAA5 492 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 TMCO4Q5TGY1 634 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 RFX8Q6ZV50 586 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 LZTR1Q8N653 840 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 OR6C4Q8NGE1 309 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 SPOCK2Q92563 424 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 WBP1Q96G27 269 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 CELF6Q96J87 481 aaKnown RBP11.54□□□□□ -0.56
SCFD1-206ENST00000484733 EXOC2Q96KP1 924 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 PEBP4Q96S96 227 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 NAT10Q9H0A0 1025 aaKnown RBP11.54□□□□□ -0.56
SCFD1-206ENST00000484733 DHX35Q9H5Z1 703 aaKnown RBP11.54□□□□□ -0.56
SCFD1-206ENST00000484733 THSD1Q9NS62 852 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 COQ6Q9Y2Z9 468 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 DGKBQ9Y6T7 804 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 A0A1W2PNU3 283 aaPredicted RBP11.54□□□□□ -0.56
SCFD1-206ENST00000484733 A0A1W2PQC6 194 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 RNF8O76064 485 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 ERCC2P18074 760 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 RGRP47804 291 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 RENBPP51606 427 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 KIAA1024LP59773 190 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 SRP54P61011 504 aaKnown RBP11.54□□□□□ -0.56
SCFD1-206ENST00000484733 ASIC2Q16515 512 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 CFAP58Q5T655 872 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 CYP4V2Q6ZWL3 525 aaPredicted RBP11.54□□□□□ -0.56
SCFD1-206ENST00000484733 ZSWIM9Q86XI8 627 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 GKN2Q86XP6 184 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 CAMK1DQ8IU85 385 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 ARL10Q8N8L6 244 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 SLC39A7Q92504 469 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 WDR92Q96MX6 357 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 ZNF599Q96NL3 588 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 SLC46A1Q96NT5 459 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 SATB2Q9UPW6 733 aa11.54□□□□□ -0.56
SCFD1-206ENST00000484733 SMTNL1A8MU46 457 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 MUSKO15146 869 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 DAPK3O43293 454 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 PALMO75781 387 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 TNFP01375 233 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 CTSEP14091 401 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 RBMS1P29558 406 aaKnown RBP11.53□□□□□ -0.56
SCFD1-206ENST00000484733 MIPP30301 263 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 TMPRSS3P57727 454 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 POLR2LP62875 67 aaKnown RBP11.53□□□□□ -0.56
SCFD1-206ENST00000484733 RALGDSQ12967 914 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 INPP5AQ14642 412 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 ENPP7Q6UWV6 458 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 DPPA4Q7L190 304 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 TSEN2Q8NCE0 465 aaKnown RBP11.53□□□□□ -0.56
SCFD1-206ENST00000484733 WDR36Q8NI36 951 aaKnown RBP11.53□□□□□ -0.56
SCFD1-206ENST00000484733 SNRNP27Q8WVK2 155 aaKnown RBP11.53□□□□□ -0.56
SCFD1-206ENST00000484733 KCNE4Q8WWG9 221 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 TRIM11Q96F44 468 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 CCDC97Q96F63 343 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-206ENST00000484733 ATXN7L3BQ96GX2 97 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 CCDC3Q9BQI4 270 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 CINPQ9BW66 212 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-206ENST00000484733 KLQ9UEF7 1012 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 SCINQ9Y6U3 715 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 A0A1W2PQ67 120 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 LRRC53A6NM62 1247 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 CDRT15L2A8MXV6 281 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 TMX2-CTNND1H3BSU7 103 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 TRAFD1O14545 582 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-206ENST00000484733 TNFRSF10CO14798 259 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 PRPSAP2O60256 369 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 FTLP02792 175 aaPredicted RBP11.53□□□□□ -0.56
SCFD1-206ENST00000484733 MYBL1P10243 752 aa11.53□□□□□ -0.56
SCFD1-206ENST00000484733 PCK1P35558 622 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms