RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 RYKP34925 604 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 HOXD13P35453 343 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 MLH1P40692 756 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 RGS2P41220 211 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 KCNJ4P48050 445 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 RPL7AP62424 266 aaKnown RBP6.91□□□□□ -1.3
UBR3-210ENST00000484596 DCTN2Q13561 401 aaKnown RBP6.91□□□□□ -1.3
UBR3-210ENST00000484596 CUL4AQ13619 759 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 DUSP6Q16828 381 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 WASHC2DQ5SRD0 308 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 CFAP58Q5T655 872 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 ENOSF1Q7L5Y1 443 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 PALB2Q86YC2 1186 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 DENND6AQ8IWF6 608 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 TEX45Q8NA69 505 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 GFM1Q96RP9 751 aaKnown RBP6.91□□□□□ -1.3
UBR3-210ENST00000484596 LBHD1Q9BQE6 289 aaPredicted RBP6.91□□□□□ -1.3
UBR3-210ENST00000484596 ITPAQ9BY32 194 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 RANBP17Q9H2T7 1088 aaKnown RBP6.91□□□□□ -1.3
UBR3-210ENST00000484596 BRF2Q9HAW0 419 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 SIRT3Q9NTG7 399 aaPredicted RBP6.91□□□□□ -1.3
UBR3-210ENST00000484596 A4GNTQ9UNA3 340 aa6.91□□□□□ -1.3
UBR3-210ENST00000484596 MYMKA6NI61 221 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 LRRC53A6NM62 1247 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 TAF4O00268 1085 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 MTA2O94776 668 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 CCNDBP1O95273 360 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 MLYCDO95822 493 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 KRT20P35900 424 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 TMPRSS3P57727 454 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 RPS3AP61247 264 aaKnown RBP6.9□□□□□ -1.3
UBR3-210ENST00000484596 PRTGQ2VWP7 1150 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 TXNDC8Q6A555 127 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 KLHL24Q6TFL4 600 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 ZNF517Q6ZMY9 492 aaPredicted RBP6.9□□□□□ -1.3
UBR3-210ENST00000484596 COLCA1Q6ZS62 124 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 SLC46A3Q7Z3Q1 461 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 PATL1Q86TB9 770 aaKnown RBP6.9□□□□□ -1.3
UBR3-210ENST00000484596 LURAP1LQ8IV03 231 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 KIAA2013Q8IYS2 634 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 TMEM199Q8N511 208 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 LSMEM1Q8N8F7 131 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 ENGASEQ8NFI3 743 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 TMEM18Q96B42 140 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 VCPIP1Q96JH7 1222 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 MVB12BQ9H7P6 319 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 CATSPERBQ9H7T0 1116 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 ANKRD10Q9NXR5 420 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 NCKIPSDQ9NZQ3 722 aa6.9□□□□□ -1.3
UBR3-210ENST00000484596 CCDC88BA6NC98 1476 aa6.9□□□□□ -1.31
UBR3-210ENST00000484596 B4DLN1 442 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 INSIG1O15503 277 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 CLDN7O95471 211 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 HOXB5P09067 269 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 ARSBP15848 533 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 BSGP35613 385 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 PPP3CCP48454 512 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 ENTPD1P49961 510 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 RARSP54136 660 aaKnown RBP6.89□□□□□ -1.31
UBR3-210ENST00000484596 LINC00205P59089 165 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 ZP1P60852 638 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 FAM27E3Q08E93 113 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 DCAF12L2Q5VW00 463 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 GSTA5Q7RTV2 222 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 RPAP2Q8IXW5 612 aaPredicted RBP6.89□□□□□ -1.31
UBR3-210ENST00000484596 NSUN4Q96CB9 384 aaKnown RBP6.89□□□□□ -1.31
UBR3-210ENST00000484596 YME1L1Q96TA2 773 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 HEMGNQ9BXL5 484 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 LHPPQ9H008 270 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 SYNCQ9H7C4 482 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 KRCC1Q9NPI7 259 aaPredicted RBP6.89□□□□□ -1.31
UBR3-210ENST00000484596 ZBTB40Q9NUA8 1239 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 SEPT11Q9NVA2 429 aaKnown RBP6.89□□□□□ -1.31
UBR3-210ENST00000484596 NDRG3Q9UGV2 375 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 FAM96BQ9Y3D0 163 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 SRPRBQ9Y5M8 271 aaKnown RBP6.89□□□□□ -1.31
UBR3-210ENST00000484596 TOPBP1Q92547 1522 aa6.89□□□□□ -1.31
UBR3-210ENST00000484596 WDR97A6NE52 1622 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 NPIPB15A6NHN6 443 aaPredicted RBP6.88□□□□□ -1.31
UBR3-210ENST00000484596 MS4A18H0YCH9 400 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 CHL1O00533 1208 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 PLOD3O60568 738 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 FGF2P09038 288 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 SNHG28P0DPA3 235 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 TFPIP10646 304 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 MYF6P23409 242 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 POU5F1Q01860 360 aaKnown RBP6.88□□□□□ -1.31
UBR3-210ENST00000484596 LPIN1Q14693 890 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 PPP2R5BQ15173 497 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 RNPS1Q15287 305 aaKnown RBP6.88□□□□□ -1.31
UBR3-210ENST00000484596 RILPL1Q5EBL4 403 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 MFSD4BQ5TF39 518 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 NUGGCQ68CJ6 796 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 CDC73Q6P1J9 531 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 PDXDC1Q6P996 788 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 CCDC105Q8IYK2 499 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 CNTROBQ8N137 903 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 CADM4Q8NFZ8 388 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 NEK9Q8TD19 979 aa6.88□□□□□ -1.31
UBR3-210ENST00000484596 USP6NLQ92738 828 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms