RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 ERAP2Q6P179 960 aa26.86■■□□□ 1.89
SMDT1-203ENST00000484235 ZSWIM9Q86XI8 627 aa26.86■■□□□ 1.89
SMDT1-203ENST00000484235 MFSD2AQ8NA29 543 aa26.86■■□□□ 1.89
SMDT1-203ENST00000484235 ASB12Q8WXK4 309 aa26.86■■□□□ 1.89
SMDT1-203ENST00000484235 HES6Q96HZ4 224 aa26.86■■□□□ 1.89
SMDT1-203ENST00000484235 PCDH12Q9NPG4 1184 aa26.86■■□□□ 1.89
SMDT1-203ENST00000484235 A0A1W2PR77 199 aa26.85■■□□□ 1.89
SMDT1-203ENST00000484235 RIOK3O14730 519 aaKnown RBP26.85■■□□□ 1.89
SMDT1-203ENST00000484235 PAK4O96013 591 aaPredicted RBP26.85■■□□□ 1.89
SMDT1-203ENST00000484235 AKT2P31751 481 aa26.85■■□□□ 1.89
SMDT1-203ENST00000484235 C21orf59P57076 290 aa26.85■■□□□ 1.89
SMDT1-203ENST00000484235 KIF19Q2TAC6 998 aa26.85■■□□□ 1.89
SMDT1-203ENST00000484235 TMEM52BQ4KMG9 183 aa26.85■■□□□ 1.89
SMDT1-203ENST00000484235 MINDY1Q8N5J2 469 aa26.85■■□□□ 1.89
SMDT1-203ENST00000484235 TFB1MQ8WVM0 346 aaKnown RBP26.85■■□□□ 1.89
SMDT1-203ENST00000484235 LZTFL1Q9NQ48 299 aa26.85■■□□□ 1.89
SMDT1-203ENST00000484235 PACSIN2Q9UNF0 486 aaPredicted RBP26.85■■□□□ 1.89
SMDT1-203ENST00000484235 WNT1P04628 370 aa26.84■■□□□ 1.89
SMDT1-203ENST00000484235 HLA-DQB2P05538 268 aa26.84■■□□□ 1.89
SMDT1-203ENST00000484235 HNRNPA2B1P22626 353 aaKnown RBP26.84■■□□□ 1.89
SMDT1-203ENST00000484235 OVGP1Q12889 678 aa26.84■■□□□ 1.89
SMDT1-203ENST00000484235 PRKD1Q15139 912 aaPredicted RBP26.84■■□□□ 1.89
SMDT1-203ENST00000484235 CCDC181Q5TID7 509 aa26.84■■□□□ 1.89
SMDT1-203ENST00000484235 IQCHQ86VS3 1027 aa26.84■■□□□ 1.89
SMDT1-203ENST00000484235 CNTD1Q8N815 330 aa26.84■■□□□ 1.89
SMDT1-203ENST00000484235 TMEM145Q8NBT3 493 aa26.84■■□□□ 1.89
SMDT1-203ENST00000484235 CXorf40AQ8TE69 158 aa26.84■■□□□ 1.89
SMDT1-203ENST00000484235 LENG8Q96PV6 779 aaPredicted RBP26.84■■□□□ 1.89
SMDT1-203ENST00000484235 PPP2R2CQ9Y2T4 447 aa26.84■■□□□ 1.89
SMDT1-203ENST00000484235 TTLL3Q9Y4R7 772 aa26.84■■□□□ 1.89
SMDT1-203ENST00000484235 SNX11Q9Y5W9 270 aa26.84■■□□□ 1.89
SMDT1-203ENST00000484235 APOC4-APOC2K7ER74 178 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 TLR4O00206 839 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 DDX3YO15523 660 aaKnown RBP26.83■■□□□ 1.89
SMDT1-203ENST00000484235 MMP20O60882 483 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 TJP3O95049 919 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 APOC2P02655 101 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 TRAF2Q12933 501 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 ZBTB17Q13105 803 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 FGL2Q14314 439 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 HLA-BQ31612 363 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 LAYNQ6UX15 382 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 ARRDC2Q8TBH0 407 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 PDCD6IPQ8WUM4 868 aaKnown RBP26.83■■□□□ 1.89
SMDT1-203ENST00000484235 DNAAF2Q9NVR5 837 aaKnown RBP26.83■■□□□ 1.89
SMDT1-203ENST00000484235 SEPT10Q9P0V9 454 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 PCDHB9Q9Y5E1 797 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 RAI2Q9Y5P3 530 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 HS3ST3A1Q9Y663 406 aa26.83■■□□□ 1.89
SMDT1-203ENST00000484235 CACNA1EQ15878 2313 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 MTSS1O43312 755 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 MAGEC1O60732 1142 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 PGLSO95336 258 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 CER1O95813 267 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 MMP12P39900 470 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 CTSKP43235 329 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 FAM193AP78312 1265 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 DSC2Q02487 901 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 XRCC4Q13426 336 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 ARMC12Q5T9G4 340 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 B4GALNT4Q76KP1 1039 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 ZC3H18Q86VM9 953 aaKnown RBP26.82■■□□□ 1.88
SMDT1-203ENST00000484235 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.82■■□□□ 1.88
SMDT1-203ENST00000484235 OR2I1PQ8NGU4 316 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 FAM174AQ8TBP5 190 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 HAUS1Q96CS2 278 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 HERPUD2Q9BSE4 406 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 WRAP53Q9BUR4 548 aaKnown RBP26.82■■□□□ 1.88
SMDT1-203ENST00000484235 GAREM1Q9H706 876 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 PHTF1Q9UMS5 762 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 SHROOM3Q8TF72 1996 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 PCDH15Q96QU1 1955 aa26.82■■□□□ 1.88
SMDT1-203ENST00000484235 CFAP69A5D8W1 941 aa26.81■■□□□ 1.88
SMDT1-203ENST00000484235 HACD1B0YJ81 288 aa26.81■■□□□ 1.88
SMDT1-203ENST00000484235 OPHN1O60890 802 aa26.81■■□□□ 1.88
SMDT1-203ENST00000484235 TM7SF2O76062 418 aa26.81■■□□□ 1.88
SMDT1-203ENST00000484235 NFKBIAP25963 317 aa26.81■■□□□ 1.88
SMDT1-203ENST00000484235 NIPAL4Q0D2K0 466 aa26.81■■□□□ 1.88
SMDT1-203ENST00000484235 UAP1L1Q3KQV9 507 aa26.81■■□□□ 1.88
SMDT1-203ENST00000484235 TEX44Q53QW1 395 aa26.81■■□□□ 1.88
SMDT1-203ENST00000484235 AADACL2Q6P093 401 aa26.81■■□□□ 1.88
SMDT1-203ENST00000484235 PDLIM2Q96JY6 352 aa26.81■■□□□ 1.88
SMDT1-203ENST00000484235 AGAP3Q96P47 875 aa26.81■■□□□ 1.88
SMDT1-203ENST00000484235 FZD3Q9NPG1 666 aa26.81■■□□□ 1.88
SMDT1-203ENST00000484235 CPP00450 1065 aa26.8■■□□□ 1.88
SMDT1-203ENST00000484235 PRKCGP05129 697 aa26.8■■□□□ 1.88
SMDT1-203ENST00000484235 PTMAP06454 111 aaKnown RBP26.8■■□□□ 1.88
SMDT1-203ENST00000484235 LIG3P49916 1009 aa26.8■■□□□ 1.88
SMDT1-203ENST00000484235 SLC14A1Q13336 389 aa26.8■■□□□ 1.88
SMDT1-203ENST00000484235 ZNF211Q13398 564 aaPredicted RBP26.8■■□□□ 1.88
SMDT1-203ENST00000484235 IHHQ14623 411 aa26.8■■□□□ 1.88
SMDT1-203ENST00000484235 KLHDC7BQ96G42 594 aa26.8■■□□□ 1.88
SMDT1-203ENST00000484235 ALS2CR12Q96Q35 445 aa26.8■■□□□ 1.88
SMDT1-203ENST00000484235 KLF6Q99612 283 aaPredicted RBP26.8■■□□□ 1.88
SMDT1-203ENST00000484235 MYOCQ99972 504 aa26.8■■□□□ 1.88
SMDT1-203ENST00000484235 C1QTNF7Q9BXJ2 289 aa26.8■■□□□ 1.88
SMDT1-203ENST00000484235 CA5BQ9Y2D0 317 aa26.8■■□□□ 1.88
SMDT1-203ENST00000484235 FZD6O60353 706 aa26.79■■□□□ 1.88
SMDT1-203ENST00000484235 DFNA5O60443 496 aa26.79■■□□□ 1.88
SMDT1-203ENST00000484235 CA4P22748 312 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms