RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 MICAL1Q8TDZ2 1067 aa8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 MRPS31Q92665 395 aaKnown RBP8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 E2F7Q96AV8 911 aa8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 CCDC97Q96F63 343 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 IFT43Q96FT9 208 aa8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 FEM1CQ96JP0 617 aa8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 TBATAQ96M53 351 aa8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 NDNQ99608 321 aa8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 CINPQ9BW66 212 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 C1QTNF1Q9BXJ1 281 aa8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 UNKQ9C0B0 810 aaKnown RBP8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 RETREG1Q9H6L5 497 aa8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 ACSS2Q9NR19 701 aa8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 FBXO6Q9NRD1 293 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 FBXO5Q9UKT4 447 aa8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 SSX2IPQ9Y2D8 614 aa8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 YBX2Q9Y2T7 364 aaKnown RBP8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 ASB3Q9Y575 518 aa8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 SPO11Q9Y5K1 396 aa8.9□□□□□ -0.98
CDC42SE1-204ENST00000483763 A0A0G2JND7 137 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 LINC01553A4QN01 128 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 GRM6O15303 877 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 INSIG1O15503 277 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 TIMM44O43615 452 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 SNNO75324 88 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 MOSPD3O75425 235 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 LYPLA1O75608 230 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 TMCC1O94876 653 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 LUC7L3O95232 432 aaKnown RBP8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 EPOP01588 193 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 SBK3P0C264 359 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 FGF3P11487 239 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 SLC8A1P32418 973 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 SLC7A9P82251 487 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 CREMQ03060 361 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 USP10Q14694 798 aaKnown RBP8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 LACTB2Q53H82 288 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 RBM20Q5T481 1227 aaKnown RBP8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 CENPLQ8N0S6 344 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 PPM1EQ8WY54 764 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 DNAJC1Q96KC8 554 aaKnown RBP8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 RANBP9Q96S59 729 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 PBX4Q9BYU1 374 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 PRKD2Q9BZL6 878 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 CPSF2Q9P2I0 782 aaKnown RBP8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 COPG2Q9UBF2 871 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 MARCOQ9UEW3 520 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 STK39Q9UEW8 545 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 VPS51Q9UID3 782 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 VPS28Q9UK41 221 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 SLC12A4Q9UP95 1085 aa8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 FCF1Q9Y324 198 aaKnown RBP8.9□□□□□ -0.99
CDC42SE1-204ENST00000483763 TRIOO75962 3097 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 G3V2L1 256 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 TK2O00142 265 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 LEFTY2O00292 366 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 PER2O15055 1255 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 SMAD6O43541 496 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 PRSS56P0CW18 603 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 GLRBP48167 497 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 GTF2A1P52655 376 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 TAS2R39P59534 338 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 NTHL1P78549 312 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 ACTN3Q08043 901 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 DLG1Q12959 904 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 CDH18Q13634 790 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 THOC5Q13769 683 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 ATXN7L2Q5T6C5 722 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 CCDC149Q6ZUS6 474 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 HTR3DQ70Z44 454 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 CILP2Q8IUL8 1156 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 TDRD5Q8NAT2 981 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 MDGA1Q8NFP4 955 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 OR6P1Q8NGX9 317 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 OR6K2Q8NGY2 324 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 SHKBP1Q8TBC3 707 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 DDI1Q8WTU0 396 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 OLFM1Q99784 485 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 OMDQ99983 421 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 TDRD1Q9BXT4 1180 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 NKX2-4Q9H2Z4 354 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 TLR9Q9NR96 1032 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 DNMT3BQ9UBC3 853 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 MYOFQ9NZM1 2061 aa8.89□□□□□ -0.99
CDC42SE1-204ENST00000483763 FAM95CA0A1B0GW59 222 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 BIRC5O15392 142 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 PAPSS2O95340 614 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 PRAMEF12O95522 483 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 NDST3O95803 873 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 LATS1O95835 1130 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 KITP10721 976 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 EPCAMP16422 314 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 PAMP19021 973 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 HLA-DPA1P20036 260 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 MAGEA9P43362 315 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 TRAF2Q12933 501 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 SEMA3AQ14563 771 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 GRIN2CQ14957 1233 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms