RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CELF5Q8N6W0 485 aaKnown RBP14.12□□□□□ -0.15
CLK3-204ENST00000483723 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.12□□□□□ -0.15
CLK3-204ENST00000483723 ACVR1CQ8NER5 493 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 GPR150Q8NGU9 434 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 GABPB2Q8TAK5 448 aaPredicted RBP14.12□□□□□ -0.15
CLK3-204ENST00000483723 HDAC10Q969S8 669 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 ISG20Q96AZ6 181 aaKnown RBP14.12□□□□□ -0.15
CLK3-204ENST00000483723 LRRC3BQ96PB8 259 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 ADGRE3Q9BY15 652 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 SLC2A11Q9BYW1 496 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 IQCGQ9H095 443 aaKnown RBP14.12□□□□□ -0.15
CLK3-204ENST00000483723 SFXN1Q9H9B4 322 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 FGFR1OP2Q9NVK5 253 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 MSRAQ9UJ68 235 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 FBXO10Q9UK96 956 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 HS3ST2Q9Y278 367 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 SPO11Q9Y5K1 396 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 C2orf16Q68DN1 1984 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.12□□□□□ -0.15
CLK3-204ENST00000483723 EPOPA6NHQ4 379 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 SNX3O60493 162 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 CRTAMO95727 393 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 GSRP00390 522 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 PRKCGP05129 697 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 SLC1A2P43004 574 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 MPP1Q00013 466 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 DBN1Q16643 649 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 PPM1JQ5JR12 505 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 LY6G5CQ5SRR4 150 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 TMEM184AQ6ZMB5 413 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 SPATS2Q86XZ4 545 aaKnown RBP14.12□□□□□ -0.15
CLK3-204ENST00000483723 BLOC1S5Q8TDH9 187 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 LRRC8CQ8TDW0 803 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 ING5Q8WYH8 240 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 VOPP1Q96AW1 172 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 GRAMD1AQ96CP6 724 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 TBATAQ96M53 351 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 BBS2Q9BXC9 721 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 NLE1Q9NVX2 485 aaPredicted RBP14.12□□□□□ -0.15
CLK3-204ENST00000483723 EMCNQ9ULC0 261 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 ARL5AQ9Y689 179 aa14.12□□□□□ -0.15
CLK3-204ENST00000483723 KLF11O14901 512 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 BIRC5O15392 142 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 HTRA2O43464 458 aaPredicted RBP14.11□□□□□ -0.15
CLK3-204ENST00000483723 EDF1O60869 148 aaKnown RBP14.11□□□□□ -0.15
CLK3-204ENST00000483723 RPP40O75818 363 aaKnown RBP14.11□□□□□ -0.15
CLK3-204ENST00000483723 C2P06681 752 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 F7P08709 466 aaPredicted RBP14.11□□□□□ -0.15
CLK3-204ENST00000483723 TYRP14679 529 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 MAPK8P45983 427 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 ZNF140P52738 457 aaPredicted RBP14.11□□□□□ -0.15
CLK3-204ENST00000483723 RPL26P61254 145 aaKnown RBP14.11□□□□□ -0.15
CLK3-204ENST00000483723 ILF2Q12905 390 aaKnown RBP14.11□□□□□ -0.15
CLK3-204ENST00000483723 ATXN7L2Q5T6C5 722 aaPredicted RBP14.11□□□□□ -0.15
CLK3-204ENST00000483723 PPP2R2DQ66LE6 453 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 CGB2Q6NT52 195 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 CACNA2D3Q8IZS8 1091 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 MDGA1Q8NFP4 955 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 RMDN1Q96DB5 314 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 CDKN2AIPNLQ96HQ2 116 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 ELAC2Q9BQ52 826 aaKnown RBP14.11□□□□□ -0.15
CLK3-204ENST00000483723 PITPNM3Q9BZ71 974 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 MANSC1Q9H8J5 431 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 DZANK1Q9NVP4 752 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 SIRPGQ9P1W8 387 aa14.11□□□□□ -0.15
CLK3-204ENST00000483723 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.11□□□□□ -0.15
CLK3-204ENST00000483723 RPL26L1Q9UNX3 145 aaKnown RBP14.11□□□□□ -0.15
CLK3-204ENST00000483723 A0A096LPK6 155 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 NEDD8-MDP1E9PL57 170 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 TRAFD1O14545 582 aaPredicted RBP14.1□□□□□ -0.15
CLK3-204ENST00000483723 PLIN3O60664 434 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 HAUS5O94927 633 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 S1PR4O95977 384 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 IL1BP01584 269 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 PABPC1P11940 636 aaKnown RBP14.1□□□□□ -0.15
CLK3-204ENST00000483723 SRCP12931 536 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 CD151P48509 253 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 FUT11Q495W5 492 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 DGKKQ5KSL6 1271 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 ZNF470Q6ECI4 717 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 TMC5Q6UXY8 1006 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 CMC1Q7Z7K0 106 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 LCA5Q86VQ0 697 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 CILP2Q8IUL8 1156 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 MFSD6LQ8IWD5 586 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 TTC30BQ8N4P2 665 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 ARMC2Q8NEN0 867 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 LPCAT1Q8NF37 534 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 GDPD5Q8WTR4 605 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 PIH1D2Q8WWB5 315 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 SCG3Q8WXD2 468 aaKnown RBP14.1□□□□□ -0.15
CLK3-204ENST00000483723 RSPRY1Q96DX4 576 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 DNAJC1Q96KC8 554 aaKnown RBP14.1□□□□□ -0.15
CLK3-204ENST00000483723 HACD3Q9P035 362 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 ANKRD6Q9Y2G4 727 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 STARD13Q9Y3M8 1113 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 WNT6Q9Y6F9 365 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 CCDC162PA2VCL2 907 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 WDR91A4D1P6 747 aa14.1□□□□□ -0.15
CLK3-204ENST00000483723 AURKAO14965 403 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms